Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vps35Q9EQH3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vps35Q9EQH3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vps35Q9EQH3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps35Q9EQH3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Vps35Q9EQH3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps35Q9EQH3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps35Q9EQH3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps35Q9EQH3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps35Q9EQH3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps35Q9EQH3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps35Q9EQH3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps35Q9EQH3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Vps35Q9EQH3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Vps35Q9EQH3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps35Q9EQH3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps35Q9EQH3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Vps35Q9EQH3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.95■□□□□ 0.78
Vps35Q9EQH3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Vps35Q9EQH3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps35Q9EQH3 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.95■□□□□ 0.78
Vps35Q9EQH3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.95■□□□□ 0.78
Vps35Q9EQH3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps35Q9EQH3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps35Q9EQH3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps35Q9EQH3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Vps35Q9EQH3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vps35Q9EQH3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Vps35Q9EQH3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps35Q9EQH3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps35Q9EQH3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps35Q9EQH3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps35Q9EQH3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps35Q9EQH3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps35Q9EQH3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps35Q9EQH3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps35Q9EQH3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps35Q9EQH3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps35Q9EQH3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps35Q9EQH3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.93■□□□□ 0.78
Vps35Q9EQH3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.93■□□□□ 0.78
Vps35Q9EQH3 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.93■□□□□ 0.78
Vps35Q9EQH3 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.93■□□□□ 0.78
Vps35Q9EQH3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Vps35Q9EQH3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Vps35Q9EQH3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps35Q9EQH3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.93■□□□□ 0.78
Vps35Q9EQH3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Vps35Q9EQH3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps35Q9EQH3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps35Q9EQH3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps35Q9EQH3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Vps35Q9EQH3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps35Q9EQH3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vps35Q9EQH3 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.92■□□□□ 0.78
Vps35Q9EQH3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps35Q9EQH3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps35Q9EQH3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps35Q9EQH3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vps35Q9EQH3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps35Q9EQH3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps35Q9EQH3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps35Q9EQH3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Vps35Q9EQH3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Vps35Q9EQH3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps35Q9EQH3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps35Q9EQH3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps35Q9EQH3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps35Q9EQH3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.91■□□□□ 0.78
Vps35Q9EQH3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps35Q9EQH3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.91■□□□□ 0.78
Vps35Q9EQH3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps35Q9EQH3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps35Q9EQH3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Vps35Q9EQH3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps35Q9EQH3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps35Q9EQH3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps35Q9EQH3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps35Q9EQH3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Vps35Q9EQH3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps35Q9EQH3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps35Q9EQH3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vps35Q9EQH3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.9■□□□□ 0.78
Vps35Q9EQH3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps35Q9EQH3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Vps35Q9EQH3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps35Q9EQH3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps35Q9EQH3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps35Q9EQH3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Vps35Q9EQH3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vps35Q9EQH3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vps35Q9EQH3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Vps35Q9EQH3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps35Q9EQH3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps35Q9EQH3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps35Q9EQH3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Vps35Q9EQH3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps35Q9EQH3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vps35Q9EQH3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps35Q9EQH3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms