Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nif3l1Q9EQ80 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.9■□□□□ 0.78
Nif3l1Q9EQ80 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Nif3l1Q9EQ80 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nif3l1Q9EQ80 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nif3l1Q9EQ80 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nif3l1Q9EQ80 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nif3l1Q9EQ80 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nif3l1Q9EQ80 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nif3l1Q9EQ80 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nif3l1Q9EQ80 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nif3l1Q9EQ80 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Nif3l1Q9EQ80 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nif3l1Q9EQ80 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nif3l1Q9EQ80 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Nif3l1Q9EQ80 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.87■□□□□ 0.77
Nif3l1Q9EQ80 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.87■□□□□ 0.77
Nif3l1Q9EQ80 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.87■□□□□ 0.77
Nif3l1Q9EQ80 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nif3l1Q9EQ80 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nif3l1Q9EQ80 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nif3l1Q9EQ80 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nif3l1Q9EQ80 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Nif3l1Q9EQ80 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nif3l1Q9EQ80 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Nif3l1Q9EQ80 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.86■□□□□ 0.77
Nif3l1Q9EQ80 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.86■□□□□ 0.77
Nif3l1Q9EQ80 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nif3l1Q9EQ80 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nif3l1Q9EQ80 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nif3l1Q9EQ80 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nif3l1Q9EQ80 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nif3l1Q9EQ80 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nif3l1Q9EQ80 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nif3l1Q9EQ80 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nif3l1Q9EQ80 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nif3l1Q9EQ80 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.85■□□□□ 0.77
Nif3l1Q9EQ80 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.85■□□□□ 0.77
Nif3l1Q9EQ80 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nif3l1Q9EQ80 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nif3l1Q9EQ80 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.85■□□□□ 0.77
Nif3l1Q9EQ80 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nif3l1Q9EQ80 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nif3l1Q9EQ80 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nif3l1Q9EQ80 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.84■□□□□ 0.77
Nif3l1Q9EQ80 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.84■□□□□ 0.77
Nif3l1Q9EQ80 Gm13241-201ENSMUST00000094493 780 ntBASIC19.84■□□□□ 0.77
Nif3l1Q9EQ80 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nif3l1Q9EQ80 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.83■□□□□ 0.77
Nif3l1Q9EQ80 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nif3l1Q9EQ80 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Nif3l1Q9EQ80 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nif3l1Q9EQ80 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nif3l1Q9EQ80 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nif3l1Q9EQ80 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Nif3l1Q9EQ80 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nif3l1Q9EQ80 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nif3l1Q9EQ80 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nif3l1Q9EQ80 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nif3l1Q9EQ80 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.82■□□□□ 0.76
Nif3l1Q9EQ80 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Nif3l1Q9EQ80 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Nif3l1Q9EQ80 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nif3l1Q9EQ80 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nif3l1Q9EQ80 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nif3l1Q9EQ80 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nif3l1Q9EQ80 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.81■□□□□ 0.76
Nif3l1Q9EQ80 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nif3l1Q9EQ80 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nif3l1Q9EQ80 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nif3l1Q9EQ80 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nif3l1Q9EQ80 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.81■□□□□ 0.76
Nif3l1Q9EQ80 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nif3l1Q9EQ80 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nif3l1Q9EQ80 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.8■□□□□ 0.76
Nif3l1Q9EQ80 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Nif3l1Q9EQ80 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nif3l1Q9EQ80 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nif3l1Q9EQ80 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nif3l1Q9EQ80 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Nif3l1Q9EQ80 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Nif3l1Q9EQ80 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nif3l1Q9EQ80 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nif3l1Q9EQ80 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nif3l1Q9EQ80 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.8■□□□□ 0.76
Nif3l1Q9EQ80 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nif3l1Q9EQ80 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nif3l1Q9EQ80 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nif3l1Q9EQ80 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nif3l1Q9EQ80 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nif3l1Q9EQ80 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nif3l1Q9EQ80 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.79■□□□□ 0.76
Nif3l1Q9EQ80 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nif3l1Q9EQ80 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
Nif3l1Q9EQ80 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nif3l1Q9EQ80 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nif3l1Q9EQ80 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nif3l1Q9EQ80 Notumos-201ENSMUST00000151998 2659 ntBASIC19.78■□□□□ 0.76
Nif3l1Q9EQ80 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nif3l1Q9EQ80 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms