Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rrp8Q9DB85 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.66■□□□□ 0.74
Rrp8Q9DB85 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.66■□□□□ 0.74
Rrp8Q9DB85 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.66■□□□□ 0.74
Rrp8Q9DB85 Gm9988-201ENSMUST00000069786 435 ntBASIC19.66■□□□□ 0.74
Rrp8Q9DB85 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rrp8Q9DB85 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.66■□□□□ 0.74
Rrp8Q9DB85 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rrp8Q9DB85 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rrp8Q9DB85 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rrp8Q9DB85 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp8Q9DB85 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp8Q9DB85 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp8Q9DB85 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rrp8Q9DB85 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp8Q9DB85 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Rrp8Q9DB85 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rrp8Q9DB85 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp8Q9DB85 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.65■□□□□ 0.74
Rrp8Q9DB85 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp8Q9DB85 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp8Q9DB85 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rrp8Q9DB85 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rrp8Q9DB85 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rrp8Q9DB85 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rrp8Q9DB85 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rrp8Q9DB85 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rrp8Q9DB85 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rrp8Q9DB85 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rrp8Q9DB85 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rrp8Q9DB85 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rrp8Q9DB85 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rrp8Q9DB85 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Rrp8Q9DB85 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Rrp8Q9DB85 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.63■□□□□ 0.73
Rrp8Q9DB85 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.63■□□□□ 0.73
Rrp8Q9DB85 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rrp8Q9DB85 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rrp8Q9DB85 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rrp8Q9DB85 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rrp8Q9DB85 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Rrp8Q9DB85 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rrp8Q9DB85 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rrp8Q9DB85 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rrp8Q9DB85 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.62■□□□□ 0.73
Rrp8Q9DB85 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rrp8Q9DB85 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rrp8Q9DB85 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rrp8Q9DB85 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp8Q9DB85 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp8Q9DB85 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp8Q9DB85 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Rrp8Q9DB85 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rrp8Q9DB85 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp8Q9DB85 Gm10602-201ENSMUST00000098239 609 ntBASIC19.61■□□□□ 0.73
Rrp8Q9DB85 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp8Q9DB85 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp8Q9DB85 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rrp8Q9DB85 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp8Q9DB85 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.6■□□□□ 0.73
Rrp8Q9DB85 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp8Q9DB85 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp8Q9DB85 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp8Q9DB85 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp8Q9DB85 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.6■□□□□ 0.73
Rrp8Q9DB85 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rrp8Q9DB85 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp8Q9DB85 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp8Q9DB85 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp8Q9DB85 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Rrp8Q9DB85 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp8Q9DB85 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp8Q9DB85 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.59■□□□□ 0.73
Rrp8Q9DB85 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp8Q9DB85 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp8Q9DB85 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.59■□□□□ 0.73
Rrp8Q9DB85 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Rrp8Q9DB85 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp8Q9DB85 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp8Q9DB85 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp8Q9DB85 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rrp8Q9DB85 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rrp8Q9DB85 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rrp8Q9DB85 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.58■□□□□ 0.73
Rrp8Q9DB85 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rrp8Q9DB85 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rrp8Q9DB85 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
Rrp8Q9DB85 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Rrp8Q9DB85 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.58■□□□□ 0.72
Rrp8Q9DB85 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.58■□□□□ 0.72
Rrp8Q9DB85 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Rrp8Q9DB85 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rrp8Q9DB85 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rrp8Q9DB85 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rrp8Q9DB85 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rrp8Q9DB85 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rrp8Q9DB85 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rrp8Q9DB85 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rrp8Q9DB85 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rrp8Q9DB85 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms