Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Chmp2aQ9DB34 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp2aQ9DB34 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp2aQ9DB34 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp2aQ9DB34 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp2aQ9DB34 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.82■□□□□ 0.92
Chmp2aQ9DB34 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Chmp2aQ9DB34 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp2aQ9DB34 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp2aQ9DB34 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Chmp2aQ9DB34 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Chmp2aQ9DB34 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.81■□□□□ 0.92
Chmp2aQ9DB34 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp2aQ9DB34 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp2aQ9DB34 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp2aQ9DB34 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Chmp2aQ9DB34 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp2aQ9DB34 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp2aQ9DB34 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp2aQ9DB34 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp2aQ9DB34 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp2aQ9DB34 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp2aQ9DB34 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp2aQ9DB34 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp2aQ9DB34 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp2aQ9DB34 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp2aQ9DB34 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2aQ9DB34 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2aQ9DB34 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2aQ9DB34 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2aQ9DB34 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2aQ9DB34 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2aQ9DB34 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2aQ9DB34 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Chmp2aQ9DB34 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2aQ9DB34 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Chmp2aQ9DB34 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2aQ9DB34 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2aQ9DB34 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
Chmp2aQ9DB34 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2aQ9DB34 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp2aQ9DB34 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.78■□□□□ 0.92
Chmp2aQ9DB34 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp2aQ9DB34 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp2aQ9DB34 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp2aQ9DB34 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp2aQ9DB34 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Chmp2aQ9DB34 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp2aQ9DB34 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Chmp2aQ9DB34 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Chmp2aQ9DB34 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp2aQ9DB34 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp2aQ9DB34 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp2aQ9DB34 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp2aQ9DB34 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp2aQ9DB34 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp2aQ9DB34 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp2aQ9DB34 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp2aQ9DB34 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp2aQ9DB34 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.77■□□□□ 0.92
Chmp2aQ9DB34 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp2aQ9DB34 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp2aQ9DB34 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp2aQ9DB34 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chmp2aQ9DB34 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chmp2aQ9DB34 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chmp2aQ9DB34 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp2aQ9DB34 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp2aQ9DB34 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp2aQ9DB34 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.76■□□□□ 0.91
Chmp2aQ9DB34 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Chmp2aQ9DB34 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp2aQ9DB34 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Chmp2aQ9DB34 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.76■□□□□ 0.91
Chmp2aQ9DB34 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp2aQ9DB34 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp2aQ9DB34 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp2aQ9DB34 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp2aQ9DB34 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp2aQ9DB34 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Chmp2aQ9DB34 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp2aQ9DB34 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp2aQ9DB34 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp2aQ9DB34 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.75■□□□□ 0.91
Chmp2aQ9DB34 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp2aQ9DB34 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp2aQ9DB34 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Chmp2aQ9DB34 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp2aQ9DB34 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Chmp2aQ9DB34 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp2aQ9DB34 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Chmp2aQ9DB34 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp2aQ9DB34 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.74■□□□□ 0.91
Chmp2aQ9DB34 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp2aQ9DB34 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp2aQ9DB34 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp2aQ9DB34 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Chmp2aQ9DB34 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp2aQ9DB34 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chmp2aQ9DB34 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms