Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim42Q9D2H5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Trim42Q9D2H5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim42Q9D2H5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim42Q9D2H5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim42Q9D2H5 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Trim42Q9D2H5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Trim42Q9D2H5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.87■□□□□ 0.77
Trim42Q9D2H5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim42Q9D2H5 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.87■□□□□ 0.77
Trim42Q9D2H5 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trim42Q9D2H5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Trim42Q9D2H5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim42Q9D2H5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Trim42Q9D2H5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Trim42Q9D2H5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim42Q9D2H5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim42Q9D2H5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim42Q9D2H5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim42Q9D2H5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim42Q9D2H5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.86■□□□□ 0.77
Trim42Q9D2H5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim42Q9D2H5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim42Q9D2H5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim42Q9D2H5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.86■□□□□ 0.77
Trim42Q9D2H5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim42Q9D2H5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim42Q9D2H5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Trim42Q9D2H5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.85■□□□□ 0.77
Trim42Q9D2H5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim42Q9D2H5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Trim42Q9D2H5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim42Q9D2H5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.85■□□□□ 0.77
Trim42Q9D2H5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim42Q9D2H5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim42Q9D2H5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.85■□□□□ 0.77
Trim42Q9D2H5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Trim42Q9D2H5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim42Q9D2H5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim42Q9D2H5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim42Q9D2H5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim42Q9D2H5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Trim42Q9D2H5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Trim42Q9D2H5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.83■□□□□ 0.77
Trim42Q9D2H5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Trim42Q9D2H5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim42Q9D2H5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim42Q9D2H5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim42Q9D2H5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.83■□□□□ 0.77
Trim42Q9D2H5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim42Q9D2H5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim42Q9D2H5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Trim42Q9D2H5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.83■□□□□ 0.76
Trim42Q9D2H5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim42Q9D2H5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trim42Q9D2H5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim42Q9D2H5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trim42Q9D2H5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim42Q9D2H5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim42Q9D2H5 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.82■□□□□ 0.76
Trim42Q9D2H5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim42Q9D2H5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim42Q9D2H5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim42Q9D2H5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim42Q9D2H5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim42Q9D2H5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim42Q9D2H5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.82■□□□□ 0.76
Trim42Q9D2H5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.81■□□□□ 0.76
Trim42Q9D2H5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim42Q9D2H5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim42Q9D2H5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim42Q9D2H5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim42Q9D2H5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trim42Q9D2H5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim42Q9D2H5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim42Q9D2H5 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.81■□□□□ 0.76
Trim42Q9D2H5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trim42Q9D2H5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.81■□□□□ 0.76
Trim42Q9D2H5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trim42Q9D2H5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim42Q9D2H5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim42Q9D2H5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.81■□□□□ 0.76
Trim42Q9D2H5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim42Q9D2H5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim42Q9D2H5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim42Q9D2H5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trim42Q9D2H5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim42Q9D2H5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trim42Q9D2H5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trim42Q9D2H5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim42Q9D2H5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Trim42Q9D2H5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim42Q9D2H5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim42Q9D2H5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim42Q9D2H5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Trim42Q9D2H5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim42Q9D2H5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim42Q9D2H5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim42Q9D2H5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim42Q9D2H5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms