Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ndc80Q9D0F1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Ndc80Q9D0F1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Ndc80Q9D0F1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.29■□□□□ 0.84
Ndc80Q9D0F1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ndc80Q9D0F1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ndc80Q9D0F1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ndc80Q9D0F1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ndc80Q9D0F1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ndc80Q9D0F1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ndc80Q9D0F1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ndc80Q9D0F1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.28■□□□□ 0.84
Ndc80Q9D0F1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ndc80Q9D0F1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ndc80Q9D0F1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ndc80Q9D0F1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ndc80Q9D0F1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ndc80Q9D0F1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ndc80Q9D0F1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ndc80Q9D0F1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ndc80Q9D0F1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ndc80Q9D0F1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ndc80Q9D0F1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ndc80Q9D0F1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.27■□□□□ 0.84
Ndc80Q9D0F1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ndc80Q9D0F1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ndc80Q9D0F1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ndc80Q9D0F1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.27■□□□□ 0.84
Ndc80Q9D0F1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ndc80Q9D0F1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ndc80Q9D0F1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.27■□□□□ 0.83
Ndc80Q9D0F1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ndc80Q9D0F1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ndc80Q9D0F1 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.27■□□□□ 0.83
Ndc80Q9D0F1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ndc80Q9D0F1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ndc80Q9D0F1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ndc80Q9D0F1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ndc80Q9D0F1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
Ndc80Q9D0F1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.26■□□□□ 0.83
Ndc80Q9D0F1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ndc80Q9D0F1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ndc80Q9D0F1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ndc80Q9D0F1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ndc80Q9D0F1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ndc80Q9D0F1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ndc80Q9D0F1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ndc80Q9D0F1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ndc80Q9D0F1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ndc80Q9D0F1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ndc80Q9D0F1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ndc80Q9D0F1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ndc80Q9D0F1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ndc80Q9D0F1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ndc80Q9D0F1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ndc80Q9D0F1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ndc80Q9D0F1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ndc80Q9D0F1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ndc80Q9D0F1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Ndc80Q9D0F1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ndc80Q9D0F1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Ndc80Q9D0F1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ndc80Q9D0F1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.23■□□□□ 0.83
Ndc80Q9D0F1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.23■□□□□ 0.83
Ndc80Q9D0F1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ndc80Q9D0F1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.23■□□□□ 0.83
Ndc80Q9D0F1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ndc80Q9D0F1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ndc80Q9D0F1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ndc80Q9D0F1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ndc80Q9D0F1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ndc80Q9D0F1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ndc80Q9D0F1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ndc80Q9D0F1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ndc80Q9D0F1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ndc80Q9D0F1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.22■□□□□ 0.83
Ndc80Q9D0F1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.22■□□□□ 0.83
Ndc80Q9D0F1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ndc80Q9D0F1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.22■□□□□ 0.83
Ndc80Q9D0F1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.22■□□□□ 0.83
Ndc80Q9D0F1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ndc80Q9D0F1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ndc80Q9D0F1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ndc80Q9D0F1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ndc80Q9D0F1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ndc80Q9D0F1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Ndc80Q9D0F1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.21■□□□□ 0.83
Ndc80Q9D0F1 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.21■□□□□ 0.83
Ndc80Q9D0F1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ndc80Q9D0F1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.21■□□□□ 0.83
Ndc80Q9D0F1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ndc80Q9D0F1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ndc80Q9D0F1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ndc80Q9D0F1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ndc80Q9D0F1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ndc80Q9D0F1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ndc80Q9D0F1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ndc80Q9D0F1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ndc80Q9D0F1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ndc80Q9D0F1 Golph3-202ENSMUST00000226517 2359 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms