Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shmt2Q9CZN7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Shmt2Q9CZN7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Shmt2Q9CZN7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Shmt2Q9CZN7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shmt2Q9CZN7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Shmt2Q9CZN7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shmt2Q9CZN7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Shmt2Q9CZN7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shmt2Q9CZN7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shmt2Q9CZN7 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.07■□□□□ 0.64
Shmt2Q9CZN7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shmt2Q9CZN7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shmt2Q9CZN7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Shmt2Q9CZN7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.07■□□□□ 0.64
Shmt2Q9CZN7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Shmt2Q9CZN7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Shmt2Q9CZN7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.07■□□□□ 0.64
Shmt2Q9CZN7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shmt2Q9CZN7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Shmt2Q9CZN7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Shmt2Q9CZN7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.06■□□□□ 0.64
Shmt2Q9CZN7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Shmt2Q9CZN7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shmt2Q9CZN7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shmt2Q9CZN7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shmt2Q9CZN7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shmt2Q9CZN7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shmt2Q9CZN7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shmt2Q9CZN7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shmt2Q9CZN7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shmt2Q9CZN7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Shmt2Q9CZN7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shmt2Q9CZN7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.05■□□□□ 0.64
Shmt2Q9CZN7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shmt2Q9CZN7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shmt2Q9CZN7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
Shmt2Q9CZN7 Gm22238-201ENSMUST00000175222 88 ntBASIC19.05■□□□□ 0.64
Shmt2Q9CZN7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shmt2Q9CZN7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shmt2Q9CZN7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Shmt2Q9CZN7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Shmt2Q9CZN7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shmt2Q9CZN7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shmt2Q9CZN7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shmt2Q9CZN7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Shmt2Q9CZN7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Shmt2Q9CZN7 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.04■□□□□ 0.64
Shmt2Q9CZN7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Shmt2Q9CZN7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.04■□□□□ 0.64
Shmt2Q9CZN7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shmt2Q9CZN7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shmt2Q9CZN7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Shmt2Q9CZN7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shmt2Q9CZN7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shmt2Q9CZN7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Shmt2Q9CZN7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.03■□□□□ 0.64
Shmt2Q9CZN7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.03■□□□□ 0.64
Shmt2Q9CZN7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Shmt2Q9CZN7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Shmt2Q9CZN7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shmt2Q9CZN7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shmt2Q9CZN7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shmt2Q9CZN7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Shmt2Q9CZN7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.02■□□□□ 0.64
Shmt2Q9CZN7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shmt2Q9CZN7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.02■□□□□ 0.64
Shmt2Q9CZN7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shmt2Q9CZN7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shmt2Q9CZN7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Shmt2Q9CZN7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shmt2Q9CZN7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.02■□□□□ 0.64
Shmt2Q9CZN7 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.02■□□□□ 0.64
Shmt2Q9CZN7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Shmt2Q9CZN7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shmt2Q9CZN7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shmt2Q9CZN7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.02■□□□□ 0.63
Shmt2Q9CZN7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shmt2Q9CZN7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt2Q9CZN7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt2Q9CZN7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt2Q9CZN7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt2Q9CZN7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt2Q9CZN7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt2Q9CZN7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt2Q9CZN7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.01■□□□□ 0.63
Shmt2Q9CZN7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt2Q9CZN7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt2Q9CZN7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt2Q9CZN7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt2Q9CZN7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shmt2Q9CZN7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Shmt2Q9CZN7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Shmt2Q9CZN7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Shmt2Q9CZN7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
Shmt2Q9CZN7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19■□□□□ 0.63
Shmt2Q9CZN7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shmt2Q9CZN7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Shmt2Q9CZN7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shmt2Q9CZN7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms