Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rnaseh2aQ9CWY8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC24.32■■□□□ 1.48
Rnaseh2aQ9CWY8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Rnaseh2aQ9CWY8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rnaseh2aQ9CWY8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Rnaseh2aQ9CWY8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rnaseh2aQ9CWY8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Rnaseh2aQ9CWY8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rnaseh2aQ9CWY8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Rnaseh2aQ9CWY8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Rnaseh2aQ9CWY8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC24.31■■□□□ 1.48
Rnaseh2aQ9CWY8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC24.31■■□□□ 1.48
Rnaseh2aQ9CWY8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Rnaseh2aQ9CWY8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rnaseh2aQ9CWY8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rnaseh2aQ9CWY8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rnaseh2aQ9CWY8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Rnaseh2aQ9CWY8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
Rnaseh2aQ9CWY8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Rnaseh2aQ9CWY8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rnaseh2aQ9CWY8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.29■■□□□ 1.48
Rnaseh2aQ9CWY8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC24.29■■□□□ 1.48
Rnaseh2aQ9CWY8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rnaseh2aQ9CWY8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rnaseh2aQ9CWY8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
Rnaseh2aQ9CWY8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rnaseh2aQ9CWY8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Rnaseh2aQ9CWY8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rnaseh2aQ9CWY8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC24.28■■□□□ 1.48
Rnaseh2aQ9CWY8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rnaseh2aQ9CWY8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Rnaseh2aQ9CWY8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC24.27■■□□□ 1.48
Rnaseh2aQ9CWY8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC24.27■■□□□ 1.48
Rnaseh2aQ9CWY8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC24.27■■□□□ 1.48
Rnaseh2aQ9CWY8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC24.27■■□□□ 1.48
Rnaseh2aQ9CWY8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Rnaseh2aQ9CWY8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rnaseh2aQ9CWY8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rnaseh2aQ9CWY8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rnaseh2aQ9CWY8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Rnaseh2aQ9CWY8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rnaseh2aQ9CWY8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Rnaseh2aQ9CWY8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rnaseh2aQ9CWY8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC24.26■■□□□ 1.47
Rnaseh2aQ9CWY8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rnaseh2aQ9CWY8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Rnaseh2aQ9CWY8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC24.25■■□□□ 1.47
Rnaseh2aQ9CWY8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC24.25■■□□□ 1.47
Rnaseh2aQ9CWY8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rnaseh2aQ9CWY8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC24.24■■□□□ 1.47
Rnaseh2aQ9CWY8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rnaseh2aQ9CWY8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC24.24■■□□□ 1.47
Rnaseh2aQ9CWY8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Rnaseh2aQ9CWY8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC24.23■■□□□ 1.47
Rnaseh2aQ9CWY8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rnaseh2aQ9CWY8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Rnaseh2aQ9CWY8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rnaseh2aQ9CWY8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC24.23■■□□□ 1.47
Rnaseh2aQ9CWY8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Rnaseh2aQ9CWY8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rnaseh2aQ9CWY8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Rnaseh2aQ9CWY8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rnaseh2aQ9CWY8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC24.22■■□□□ 1.47
Rnaseh2aQ9CWY8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC24.22■■□□□ 1.47
Rnaseh2aQ9CWY8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rnaseh2aQ9CWY8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rnaseh2aQ9CWY8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rnaseh2aQ9CWY8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Rnaseh2aQ9CWY8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Rnaseh2aQ9CWY8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC24.21■■□□□ 1.47
Rnaseh2aQ9CWY8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Rnaseh2aQ9CWY8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rnaseh2aQ9CWY8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Rnaseh2aQ9CWY8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Rnaseh2aQ9CWY8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC24.2■■□□□ 1.47
Rnaseh2aQ9CWY8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Rnaseh2aQ9CWY8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rnaseh2aQ9CWY8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Rnaseh2aQ9CWY8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC24.2■■□□□ 1.46
Rnaseh2aQ9CWY8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rnaseh2aQ9CWY8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rnaseh2aQ9CWY8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rnaseh2aQ9CWY8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rnaseh2aQ9CWY8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rnaseh2aQ9CWY8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rnaseh2aQ9CWY8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rnaseh2aQ9CWY8 Gm6211-202ENSMUST00000167849 925 ntBASIC24.19■■□□□ 1.46
Rnaseh2aQ9CWY8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.19■■□□□ 1.46
Rnaseh2aQ9CWY8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Rnaseh2aQ9CWY8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rnaseh2aQ9CWY8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Rnaseh2aQ9CWY8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rnaseh2aQ9CWY8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rnaseh2aQ9CWY8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Rnaseh2aQ9CWY8 AC122769.4-201ENSMUST00000228166 901 ntBASIC24.18■■□□□ 1.46
Rnaseh2aQ9CWY8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rnaseh2aQ9CWY8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rnaseh2aQ9CWY8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC24.18■■□□□ 1.46
Rnaseh2aQ9CWY8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rnaseh2aQ9CWY8 Gm10571-201ENSMUST00000097869 1638 ntBASIC24.17■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms