Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.17■□□□□ 0.66
Khdc3Q9CWU5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Khdc3Q9CWU5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Khdc3Q9CWU5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.16■□□□□ 0.66
Khdc3Q9CWU5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Khdc3Q9CWU5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Khdc3Q9CWU5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.16■□□□□ 0.66
Khdc3Q9CWU5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.16■□□□□ 0.66
Khdc3Q9CWU5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Khdc3Q9CWU5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Khdc3Q9CWU5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Khdc3Q9CWU5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Khdc3Q9CWU5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Khdc3Q9CWU5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Khdc3Q9CWU5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.15■□□□□ 0.66
Khdc3Q9CWU5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Khdc3Q9CWU5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Khdc3Q9CWU5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Khdc3Q9CWU5 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Khdc3Q9CWU5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Khdc3Q9CWU5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Khdc3Q9CWU5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Khdc3Q9CWU5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
Khdc3Q9CWU5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Khdc3Q9CWU5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Khdc3Q9CWU5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Khdc3Q9CWU5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Khdc3Q9CWU5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Khdc3Q9CWU5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Khdc3Q9CWU5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Khdc3Q9CWU5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Khdc3Q9CWU5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Khdc3Q9CWU5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Khdc3Q9CWU5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Khdc3Q9CWU5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Khdc3Q9CWU5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Khdc3Q9CWU5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Khdc3Q9CWU5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Khdc3Q9CWU5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Khdc3Q9CWU5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Khdc3Q9CWU5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.13■□□□□ 0.65
Khdc3Q9CWU5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Khdc3Q9CWU5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Khdc3Q9CWU5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.13■□□□□ 0.65
Khdc3Q9CWU5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Khdc3Q9CWU5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Khdc3Q9CWU5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Khdc3Q9CWU5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Khdc3Q9CWU5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Khdc3Q9CWU5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Khdc3Q9CWU5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Khdc3Q9CWU5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Khdc3Q9CWU5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
Khdc3Q9CWU5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Khdc3Q9CWU5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Khdc3Q9CWU5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Khdc3Q9CWU5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Khdc3Q9CWU5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Khdc3Q9CWU5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Khdc3Q9CWU5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Khdc3Q9CWU5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Khdc3Q9CWU5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Khdc3Q9CWU5 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.11■□□□□ 0.65
Khdc3Q9CWU5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Khdc3Q9CWU5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.11■□□□□ 0.65
Khdc3Q9CWU5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Khdc3Q9CWU5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Khdc3Q9CWU5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Khdc3Q9CWU5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Khdc3Q9CWU5 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.1■□□□□ 0.65
Khdc3Q9CWU5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Khdc3Q9CWU5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Khdc3Q9CWU5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Khdc3Q9CWU5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.1■□□□□ 0.65
Khdc3Q9CWU5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.1■□□□□ 0.65
Khdc3Q9CWU5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.1■□□□□ 0.65
Khdc3Q9CWU5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Khdc3Q9CWU5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Khdc3Q9CWU5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Khdc3Q9CWU5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Khdc3Q9CWU5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Khdc3Q9CWU5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Khdc3Q9CWU5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Khdc3Q9CWU5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Khdc3Q9CWU5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Khdc3Q9CWU5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.09■□□□□ 0.65
Khdc3Q9CWU5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.09■□□□□ 0.65
Khdc3Q9CWU5 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Khdc3Q9CWU5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.09■□□□□ 0.65
Khdc3Q9CWU5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Khdc3Q9CWU5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Khdc3Q9CWU5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Khdc3Q9CWU5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Khdc3Q9CWU5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Khdc3Q9CWU5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Khdc3Q9CWU5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Khdc3Q9CWU5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Khdc3Q9CWU5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Khdc3Q9CWU5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Khdc3Q9CWU5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms