Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf135Q9CWS1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.83■□□□□ 0.93
Rnf135Q9CWS1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf135Q9CWS1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf135Q9CWS1 Gm13241-201ENSMUST00000094493 780 ntBASIC20.83■□□□□ 0.93
Rnf135Q9CWS1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf135Q9CWS1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf135Q9CWS1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf135Q9CWS1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf135Q9CWS1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf135Q9CWS1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf135Q9CWS1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf135Q9CWS1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf135Q9CWS1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf135Q9CWS1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf135Q9CWS1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf135Q9CWS1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf135Q9CWS1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf135Q9CWS1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.82■□□□□ 0.92
Rnf135Q9CWS1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf135Q9CWS1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf135Q9CWS1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf135Q9CWS1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rnf135Q9CWS1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rnf135Q9CWS1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf135Q9CWS1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf135Q9CWS1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf135Q9CWS1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf135Q9CWS1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf135Q9CWS1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf135Q9CWS1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.8■□□□□ 0.92
Rnf135Q9CWS1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.8■□□□□ 0.92
Rnf135Q9CWS1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.8■□□□□ 0.92
Rnf135Q9CWS1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf135Q9CWS1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf135Q9CWS1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Rnf135Q9CWS1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf135Q9CWS1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Rnf135Q9CWS1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf135Q9CWS1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Rnf135Q9CWS1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf135Q9CWS1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf135Q9CWS1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf135Q9CWS1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf135Q9CWS1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf135Q9CWS1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.79■□□□□ 0.92
Rnf135Q9CWS1 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.79■□□□□ 0.92
Rnf135Q9CWS1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf135Q9CWS1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf135Q9CWS1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rnf135Q9CWS1 Iqck-206ENSMUST00000208658 2891 ntBASIC20.79■□□□□ 0.92
Rnf135Q9CWS1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf135Q9CWS1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf135Q9CWS1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf135Q9CWS1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf135Q9CWS1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.78■□□□□ 0.92
Rnf135Q9CWS1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf135Q9CWS1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.78■□□□□ 0.92
Rnf135Q9CWS1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.78■□□□□ 0.92
Rnf135Q9CWS1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rnf135Q9CWS1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf135Q9CWS1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf135Q9CWS1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf135Q9CWS1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf135Q9CWS1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf135Q9CWS1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Rnf135Q9CWS1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf135Q9CWS1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf135Q9CWS1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf135Q9CWS1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf135Q9CWS1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Rnf135Q9CWS1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf135Q9CWS1 Gm9847-201ENSMUST00000052528 599 ntBASIC20.76■□□□□ 0.91
Rnf135Q9CWS1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.76■□□□□ 0.91
Rnf135Q9CWS1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf135Q9CWS1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Rnf135Q9CWS1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Rnf135Q9CWS1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf135Q9CWS1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf135Q9CWS1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Rnf135Q9CWS1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf135Q9CWS1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.75■□□□□ 0.91
Rnf135Q9CWS1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.75■□□□□ 0.91
Rnf135Q9CWS1 Gm40881-201ENSMUST00000223397 166 ntBASIC20.75■□□□□ 0.91
Rnf135Q9CWS1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf135Q9CWS1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf135Q9CWS1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf135Q9CWS1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf135Q9CWS1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
Rnf135Q9CWS1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf135Q9CWS1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf135Q9CWS1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.74■□□□□ 0.91
Rnf135Q9CWS1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Rnf135Q9CWS1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf135Q9CWS1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf135Q9CWS1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Rnf135Q9CWS1 Gm22238-201ENSMUST00000175222 88 ntBASIC20.73■□□□□ 0.91
Rnf135Q9CWS1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.73■□□□□ 0.91
Rnf135Q9CWS1 Gm7143-201ENSMUST00000222811 859 ntBASIC20.73■□□□□ 0.91
Rnf135Q9CWS1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms