Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Lrrc40Q9CRC8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrc40Q9CRC8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.9■□□□□ 0.78
Lrrc40Q9CRC8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Lrrc40Q9CRC8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrc40Q9CRC8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrc40Q9CRC8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrc40Q9CRC8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrc40Q9CRC8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Lrrc40Q9CRC8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrc40Q9CRC8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.89■□□□□ 0.77
Lrrc40Q9CRC8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.89■□□□□ 0.77
Lrrc40Q9CRC8 Mir6236-201ENSMUST00000184437 123 ntBASIC19.89■□□□□ 0.77
Lrrc40Q9CRC8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Lrrc40Q9CRC8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Lrrc40Q9CRC8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrc40Q9CRC8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrc40Q9CRC8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Lrrc40Q9CRC8 Gm9959-201ENSMUST00000068277 390 ntBASIC19.89■□□□□ 0.77
Lrrc40Q9CRC8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrc40Q9CRC8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrc40Q9CRC8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrc40Q9CRC8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrc40Q9CRC8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrc40Q9CRC8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrc40Q9CRC8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrc40Q9CRC8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrc40Q9CRC8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrc40Q9CRC8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrc40Q9CRC8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrc40Q9CRC8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.87■□□□□ 0.77
Lrrc40Q9CRC8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc40Q9CRC8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc40Q9CRC8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc40Q9CRC8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc40Q9CRC8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc40Q9CRC8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc40Q9CRC8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.87■□□□□ 0.77
Lrrc40Q9CRC8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.87■□□□□ 0.77
Lrrc40Q9CRC8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc40Q9CRC8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Lrrc40Q9CRC8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc40Q9CRC8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc40Q9CRC8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.87■□□□□ 0.77
Lrrc40Q9CRC8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Lrrc40Q9CRC8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrc40Q9CRC8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrc40Q9CRC8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Lrrc40Q9CRC8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrc40Q9CRC8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Lrrc40Q9CRC8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrc40Q9CRC8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrc40Q9CRC8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrc40Q9CRC8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrc40Q9CRC8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrc40Q9CRC8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrc40Q9CRC8 Gm22238-201ENSMUST00000175222 88 ntBASIC19.85■□□□□ 0.77
Lrrc40Q9CRC8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.85■□□□□ 0.77
Lrrc40Q9CRC8 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.85■□□□□ 0.77
Lrrc40Q9CRC8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrc40Q9CRC8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrc40Q9CRC8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.85■□□□□ 0.77
Lrrc40Q9CRC8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Lrrc40Q9CRC8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrc40Q9CRC8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.84■□□□□ 0.77
Lrrc40Q9CRC8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrc40Q9CRC8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrc40Q9CRC8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Lrrc40Q9CRC8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrc40Q9CRC8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrc40Q9CRC8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrc40Q9CRC8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrc40Q9CRC8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrc40Q9CRC8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrc40Q9CRC8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Lrrc40Q9CRC8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrc40Q9CRC8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrc40Q9CRC8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Lrrc40Q9CRC8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrc40Q9CRC8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lrrc40Q9CRC8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lrrc40Q9CRC8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lrrc40Q9CRC8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lrrc40Q9CRC8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lrrc40Q9CRC8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.83■□□□□ 0.77
Lrrc40Q9CRC8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.83■□□□□ 0.77
Lrrc40Q9CRC8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Lrrc40Q9CRC8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lrrc40Q9CRC8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrc40Q9CRC8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrc40Q9CRC8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.82■□□□□ 0.76
Lrrc40Q9CRC8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Lrrc40Q9CRC8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrc40Q9CRC8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrc40Q9CRC8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrc40Q9CRC8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.82■□□□□ 0.76
Lrrc40Q9CRC8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.82■□□□□ 0.76
Lrrc40Q9CRC8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Lrrc40Q9CRC8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrc40Q9CRC8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms