Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rer1Q9CQU3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.35■□□□□ 0.21
Rer1Q9CQU3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rer1Q9CQU3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rer1Q9CQU3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rer1Q9CQU3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rer1Q9CQU3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.34■□□□□ 0.21
Rer1Q9CQU3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rer1Q9CQU3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rer1Q9CQU3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rer1Q9CQU3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.34■□□□□ 0.21
Rer1Q9CQU3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rer1Q9CQU3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rer1Q9CQU3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.34■□□□□ 0.21
Rer1Q9CQU3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rer1Q9CQU3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rer1Q9CQU3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rer1Q9CQU3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Rer1Q9CQU3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rer1Q9CQU3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Rer1Q9CQU3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.33■□□□□ 0.2
Rer1Q9CQU3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.33■□□□□ 0.2
Rer1Q9CQU3 Gm7143-201ENSMUST00000222811 859 ntBASIC16.33■□□□□ 0.2
Rer1Q9CQU3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rer1Q9CQU3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rer1Q9CQU3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rer1Q9CQU3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rer1Q9CQU3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rer1Q9CQU3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rer1Q9CQU3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.33■□□□□ 0.2
Rer1Q9CQU3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rer1Q9CQU3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rer1Q9CQU3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rer1Q9CQU3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rer1Q9CQU3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rer1Q9CQU3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.32■□□□□ 0.2
Rer1Q9CQU3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rer1Q9CQU3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rer1Q9CQU3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.31■□□□□ 0.2
Rer1Q9CQU3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rer1Q9CQU3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rer1Q9CQU3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rer1Q9CQU3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rer1Q9CQU3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rer1Q9CQU3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rer1Q9CQU3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rer1Q9CQU3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rer1Q9CQU3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rer1Q9CQU3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rer1Q9CQU3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.3■□□□□ 0.2
Rer1Q9CQU3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rer1Q9CQU3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rer1Q9CQU3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rer1Q9CQU3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rer1Q9CQU3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.3■□□□□ 0.2
Rer1Q9CQU3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rer1Q9CQU3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rer1Q9CQU3 Gm15820-201ENSMUST00000201566 728 ntBASIC16.3■□□□□ 0.2
Rer1Q9CQU3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rer1Q9CQU3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rer1Q9CQU3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Rer1Q9CQU3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rer1Q9CQU3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rer1Q9CQU3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rer1Q9CQU3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rer1Q9CQU3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rer1Q9CQU3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rer1Q9CQU3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rer1Q9CQU3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rer1Q9CQU3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.29■□□□□ 0.2
Rer1Q9CQU3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.29■□□□□ 0.2
Rer1Q9CQU3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rer1Q9CQU3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rer1Q9CQU3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rer1Q9CQU3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rer1Q9CQU3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.28■□□□□ 0.2
Rer1Q9CQU3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rer1Q9CQU3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rer1Q9CQU3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rer1Q9CQU3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rer1Q9CQU3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rer1Q9CQU3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.28■□□□□ 0.2
Rer1Q9CQU3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rer1Q9CQU3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rer1Q9CQU3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rer1Q9CQU3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rer1Q9CQU3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rer1Q9CQU3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rer1Q9CQU3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
Rer1Q9CQU3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rer1Q9CQU3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rer1Q9CQU3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rer1Q9CQU3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rer1Q9CQU3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rer1Q9CQU3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rer1Q9CQU3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rer1Q9CQU3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rer1Q9CQU3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Rer1Q9CQU3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Rer1Q9CQU3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms