Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lsm7Q9CQQ8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Lsm7Q9CQQ8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm7Q9CQQ8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.25■□□□□ 0.83
Lsm7Q9CQQ8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm7Q9CQQ8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm7Q9CQQ8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm7Q9CQQ8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm7Q9CQQ8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Lsm7Q9CQQ8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm7Q9CQQ8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsm7Q9CQQ8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Lsm7Q9CQQ8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsm7Q9CQQ8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lsm7Q9CQQ8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.24■□□□□ 0.83
Lsm7Q9CQQ8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.24■□□□□ 0.83
Lsm7Q9CQQ8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsm7Q9CQQ8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsm7Q9CQQ8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Lsm7Q9CQQ8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsm7Q9CQQ8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsm7Q9CQQ8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm7Q9CQQ8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm7Q9CQQ8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm7Q9CQQ8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm7Q9CQQ8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm7Q9CQQ8 Gm26833-201ENSMUST00000180899 440 ntBASIC20.23■□□□□ 0.83
Lsm7Q9CQQ8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.23■□□□□ 0.83
Lsm7Q9CQQ8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
Lsm7Q9CQQ8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm7Q9CQQ8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm7Q9CQQ8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm7Q9CQQ8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm7Q9CQQ8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm7Q9CQQ8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Lsm7Q9CQQ8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.22■□□□□ 0.83
Lsm7Q9CQQ8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm7Q9CQQ8 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.22■□□□□ 0.83
Lsm7Q9CQQ8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm7Q9CQQ8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm7Q9CQQ8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.22■□□□□ 0.83
Lsm7Q9CQQ8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.22■□□□□ 0.83
Lsm7Q9CQQ8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm7Q9CQQ8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm7Q9CQQ8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm7Q9CQQ8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.22■□□□□ 0.83
Lsm7Q9CQQ8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm7Q9CQQ8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsm7Q9CQQ8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsm7Q9CQQ8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsm7Q9CQQ8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Lsm7Q9CQQ8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.21■□□□□ 0.83
Lsm7Q9CQQ8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsm7Q9CQQ8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.21■□□□□ 0.83
Lsm7Q9CQQ8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Lsm7Q9CQQ8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lsm7Q9CQQ8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lsm7Q9CQQ8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Lsm7Q9CQQ8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lsm7Q9CQQ8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lsm7Q9CQQ8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lsm7Q9CQQ8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm7Q9CQQ8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
Lsm7Q9CQQ8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lsm7Q9CQQ8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lsm7Q9CQQ8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lsm7Q9CQQ8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.18■□□□□ 0.82
Lsm7Q9CQQ8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.18■□□□□ 0.82
Lsm7Q9CQQ8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lsm7Q9CQQ8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lsm7Q9CQQ8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lsm7Q9CQQ8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.18■□□□□ 0.82
Lsm7Q9CQQ8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lsm7Q9CQQ8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Lsm7Q9CQQ8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms