Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TrabdQ99JY4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TrabdQ99JY4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TrabdQ99JY4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TrabdQ99JY4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TrabdQ99JY4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.87■□□□□ 0.93
TrabdQ99JY4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.87■□□□□ 0.93
TrabdQ99JY4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.87■□□□□ 0.93
TrabdQ99JY4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TrabdQ99JY4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TrabdQ99JY4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TrabdQ99JY4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.87■□□□□ 0.93
TrabdQ99JY4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TrabdQ99JY4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TrabdQ99JY4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TrabdQ99JY4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.86■□□□□ 0.93
TrabdQ99JY4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.86■□□□□ 0.93
TrabdQ99JY4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.86■□□□□ 0.93
TrabdQ99JY4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TrabdQ99JY4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TrabdQ99JY4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TrabdQ99JY4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TrabdQ99JY4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.86■□□□□ 0.93
TrabdQ99JY4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.86■□□□□ 0.93
TrabdQ99JY4 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.86■□□□□ 0.93
TrabdQ99JY4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.85■□□□□ 0.93
TrabdQ99JY4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TrabdQ99JY4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TrabdQ99JY4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TrabdQ99JY4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TrabdQ99JY4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.85■□□□□ 0.93
TrabdQ99JY4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TrabdQ99JY4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TrabdQ99JY4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TrabdQ99JY4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TrabdQ99JY4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TrabdQ99JY4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TrabdQ99JY4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TrabdQ99JY4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TrabdQ99JY4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TrabdQ99JY4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TrabdQ99JY4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TrabdQ99JY4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TrabdQ99JY4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.83■□□□□ 0.93
TrabdQ99JY4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TrabdQ99JY4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TrabdQ99JY4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TrabdQ99JY4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TrabdQ99JY4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TrabdQ99JY4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TrabdQ99JY4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TrabdQ99JY4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TrabdQ99JY4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TrabdQ99JY4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TrabdQ99JY4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TrabdQ99JY4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TrabdQ99JY4 Smad6-203ENSMUST00000179458 273 ntBASIC20.82■□□□□ 0.92
TrabdQ99JY4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TrabdQ99JY4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TrabdQ99JY4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TrabdQ99JY4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TrabdQ99JY4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TrabdQ99JY4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TrabdQ99JY4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TrabdQ99JY4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TrabdQ99JY4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TrabdQ99JY4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TrabdQ99JY4 Gm18284-201ENSMUST00000172604 624 ntBASIC20.81■□□□□ 0.92
TrabdQ99JY4 Gm43060-201ENSMUST00000200621 289 ntBASIC20.81■□□□□ 0.92
TrabdQ99JY4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TrabdQ99JY4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TrabdQ99JY4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TrabdQ99JY4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TrabdQ99JY4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TrabdQ99JY4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TrabdQ99JY4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.8■□□□□ 0.92
TrabdQ99JY4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TrabdQ99JY4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TrabdQ99JY4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TrabdQ99JY4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.8■□□□□ 0.92
TrabdQ99JY4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TrabdQ99JY4 Gm8495-201ENSMUST00000188740 694 ntBASIC20.8■□□□□ 0.92
TrabdQ99JY4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.8■□□□□ 0.92
TrabdQ99JY4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TrabdQ99JY4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TrabdQ99JY4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.8■□□□□ 0.92
TrabdQ99JY4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TrabdQ99JY4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
TrabdQ99JY4 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.8■□□□□ 0.92
TrabdQ99JY4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TrabdQ99JY4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TrabdQ99JY4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.79■□□□□ 0.92
TrabdQ99JY4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TrabdQ99JY4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.79■□□□□ 0.92
TrabdQ99JY4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.79■□□□□ 0.92
TrabdQ99JY4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TrabdQ99JY4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TrabdQ99JY4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.79■□□□□ 0.92
TrabdQ99JY4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TrabdQ99JY4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms