Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Pcdha1Q91Y21 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.9■□□□□ 0.94
Pcdha1Q91Y21 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha1Q91Y21 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha1Q91Y21 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.9■□□□□ 0.94
Pcdha1Q91Y21 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha1Q91Y21 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.9■□□□□ 0.94
Pcdha1Q91Y21 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha1Q91Y21 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.9■□□□□ 0.94
Pcdha1Q91Y21 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha1Q91Y21 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha1Q91Y21 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdha1Q91Y21 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha1Q91Y21 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Pcdha1Q91Y21 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha1Q91Y21 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Pcdha1Q91Y21 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha1Q91Y21 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdha1Q91Y21 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha1Q91Y21 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha1Q91Y21 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcdha1Q91Y21 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha1Q91Y21 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
Pcdha1Q91Y21 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdha1Q91Y21 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.88■□□□□ 0.93
Pcdha1Q91Y21 Spcs1-204ENSMUST00000226782 949 ntBASIC20.88■□□□□ 0.93
Pcdha1Q91Y21 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcdha1Q91Y21 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdha1Q91Y21 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha1Q91Y21 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha1Q91Y21 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Pcdha1Q91Y21 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha1Q91Y21 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha1Q91Y21 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha1Q91Y21 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha1Q91Y21 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha1Q91Y21 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha1Q91Y21 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha1Q91Y21 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha1Q91Y21 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdha1Q91Y21 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha1Q91Y21 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Pcdha1Q91Y21 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.86■□□□□ 0.93
Pcdha1Q91Y21 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha1Q91Y21 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha1Q91Y21 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdha1Q91Y21 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdha1Q91Y21 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Pcdha1Q91Y21 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha1Q91Y21 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha1Q91Y21 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha1Q91Y21 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Pcdha1Q91Y21 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdha1Q91Y21 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha1Q91Y21 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha1Q91Y21 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha1Q91Y21 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pcdha1Q91Y21 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha1Q91Y21 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha1Q91Y21 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.85■□□□□ 0.93
Pcdha1Q91Y21 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha1Q91Y21 Gm18284-201ENSMUST00000172604 624 ntBASIC20.85■□□□□ 0.93
Pcdha1Q91Y21 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha1Q91Y21 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.85■□□□□ 0.93
Pcdha1Q91Y21 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Pcdha1Q91Y21 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pcdha1Q91Y21 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha1Q91Y21 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha1Q91Y21 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha1Q91Y21 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha1Q91Y21 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdha1Q91Y21 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcdha1Q91Y21 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha1Q91Y21 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha1Q91Y21 Gm8495-201ENSMUST00000188740 694 ntBASIC20.84■□□□□ 0.93
Pcdha1Q91Y21 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.84■□□□□ 0.93
Pcdha1Q91Y21 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha1Q91Y21 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha1Q91Y21 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha1Q91Y21 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha1Q91Y21 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha1Q91Y21 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdha1Q91Y21 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcdha1Q91Y21 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha1Q91Y21 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Pcdha1Q91Y21 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha1Q91Y21 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Pcdha1Q91Y21 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha1Q91Y21 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha1Q91Y21 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
Pcdha1Q91Y21 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Pcdha1Q91Y21 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha1Q91Y21 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Pcdha1Q91Y21 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdha1Q91Y21 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdha1Q91Y21 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pcdha1Q91Y21 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha1Q91Y21 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha1Q91Y21 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.82■□□□□ 0.92
Pcdha1Q91Y21 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms