Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhac1Q91Y10 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhac1Q91Y10 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhac1Q91Y10 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhac1Q91Y10 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.67■□□□□ 0.58
Pcdhac1Q91Y10 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdhac1Q91Y10 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhac1Q91Y10 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhac1Q91Y10 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhac1Q91Y10 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhac1Q91Y10 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdhac1Q91Y10 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhac1Q91Y10 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhac1Q91Y10 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhac1Q91Y10 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhac1Q91Y10 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.65■□□□□ 0.58
Pcdhac1Q91Y10 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhac1Q91Y10 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhac1Q91Y10 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhac1Q91Y10 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhac1Q91Y10 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhac1Q91Y10 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhac1Q91Y10 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhac1Q91Y10 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhac1Q91Y10 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhac1Q91Y10 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.65■□□□□ 0.58
Pcdhac1Q91Y10 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhac1Q91Y10 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhac1Q91Y10 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhac1Q91Y10 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhac1Q91Y10 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.64■□□□□ 0.57
Pcdhac1Q91Y10 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhac1Q91Y10 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhac1Q91Y10 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhac1Q91Y10 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhac1Q91Y10 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhac1Q91Y10 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhac1Q91Y10 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhac1Q91Y10 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhac1Q91Y10 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhac1Q91Y10 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhac1Q91Y10 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac1Q91Y10 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.62■□□□□ 0.57
Pcdhac1Q91Y10 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhac1Q91Y10 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac1Q91Y10 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac1Q91Y10 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac1Q91Y10 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhac1Q91Y10 Rps24-207ENSMUST00000224568 714 ntBASIC18.62■□□□□ 0.57
Pcdhac1Q91Y10 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac1Q91Y10 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac1Q91Y10 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhac1Q91Y10 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhac1Q91Y10 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhac1Q91Y10 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.61■□□□□ 0.57
Pcdhac1Q91Y10 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.61■□□□□ 0.57
Pcdhac1Q91Y10 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhac1Q91Y10 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhac1Q91Y10 Etf1-202ENSMUST00000180351 108 ntBASIC18.61■□□□□ 0.57
Pcdhac1Q91Y10 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.61■□□□□ 0.57
Pcdhac1Q91Y10 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.61■□□□□ 0.57
Pcdhac1Q91Y10 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.61■□□□□ 0.57
Pcdhac1Q91Y10 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhac1Q91Y10 Gm9959-201ENSMUST00000068277 390 ntBASIC18.61■□□□□ 0.57
Pcdhac1Q91Y10 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.61■□□□□ 0.57
Pcdhac1Q91Y10 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhac1Q91Y10 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhac1Q91Y10 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pcdhac1Q91Y10 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhac1Q91Y10 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhac1Q91Y10 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdhac1Q91Y10 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhac1Q91Y10 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhac1Q91Y10 Golph3-202ENSMUST00000226517 2359 ntBASIC18.6■□□□□ 0.57
Pcdhac1Q91Y10 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhac1Q91Y10 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhac1Q91Y10 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdhac1Q91Y10 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdhac1Q91Y10 Gm45102-201ENSMUST00000207427 857 ntBASIC18.6■□□□□ 0.57
Pcdhac1Q91Y10 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhac1Q91Y10 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhac1Q91Y10 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhac1Q91Y10 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhac1Q91Y10 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhac1Q91Y10 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcdhac1Q91Y10 Gm7417-201ENSMUST00000192950 473 ntBASIC18.59■□□□□ 0.57
Pcdhac1Q91Y10 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhac1Q91Y10 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhac1Q91Y10 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhac1Q91Y10 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhac1Q91Y10 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhac1Q91Y10 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhac1Q91Y10 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhac1Q91Y10 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdhac1Q91Y10 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhac1Q91Y10 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhac1Q91Y10 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhac1Q91Y10 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhac1Q91Y10 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhac1Q91Y10 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms