Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.73■□□□□ 0.43
Pcdhga3Q91XY5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhga3Q91XY5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdhga3Q91XY5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga3Q91XY5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga3Q91XY5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga3Q91XY5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga3Q91XY5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga3Q91XY5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.72■□□□□ 0.43
Pcdhga3Q91XY5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdhga3Q91XY5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.72■□□□□ 0.43
Pcdhga3Q91XY5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga3Q91XY5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga3Q91XY5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga3Q91XY5 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga3Q91XY5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Pcdhga3Q91XY5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga3Q91XY5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga3Q91XY5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga3Q91XY5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga3Q91XY5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga3Q91XY5 Gm14117-201ENSMUST00000122417 843 ntBASIC17.71■□□□□ 0.43
Pcdhga3Q91XY5 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhga3Q91XY5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga3Q91XY5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcdhga3Q91XY5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhga3Q91XY5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga3Q91XY5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhga3Q91XY5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhga3Q91XY5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga3Q91XY5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga3Q91XY5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga3Q91XY5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga3Q91XY5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga3Q91XY5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga3Q91XY5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhga3Q91XY5 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.7■□□□□ 0.42
Pcdhga3Q91XY5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga3Q91XY5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga3Q91XY5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga3Q91XY5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga3Q91XY5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga3Q91XY5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga3Q91XY5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga3Q91XY5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.69■□□□□ 0.42
Pcdhga3Q91XY5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhga3Q91XY5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.69■□□□□ 0.42
Pcdhga3Q91XY5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga3Q91XY5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga3Q91XY5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga3Q91XY5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga3Q91XY5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhga3Q91XY5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga3Q91XY5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga3Q91XY5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
Pcdhga3Q91XY5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Pcdhga3Q91XY5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga3Q91XY5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.68■□□□□ 0.42
Pcdhga3Q91XY5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga3Q91XY5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga3Q91XY5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga3Q91XY5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga3Q91XY5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga3Q91XY5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga3Q91XY5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga3Q91XY5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.67■□□□□ 0.42
Pcdhga3Q91XY5 Gm22238-201ENSMUST00000175222 88 ntBASIC17.67■□□□□ 0.42
Pcdhga3Q91XY5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pcdhga3Q91XY5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga3Q91XY5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhga3Q91XY5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga3Q91XY5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga3Q91XY5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhga3Q91XY5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhga3Q91XY5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.66■□□□□ 0.42
Pcdhga3Q91XY5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga3Q91XY5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhga3Q91XY5 Gm9870-201ENSMUST00000063874 645 ntBASIC17.66■□□□□ 0.42
Pcdhga3Q91XY5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga3Q91XY5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga3Q91XY5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhga3Q91XY5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga3Q91XY5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga3Q91XY5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhga3Q91XY5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga3Q91XY5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga3Q91XY5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga3Q91XY5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhga3Q91XY5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga3Q91XY5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhga3Q91XY5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga3Q91XY5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga3Q91XY5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga3Q91XY5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhga3Q91XY5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhga3Q91XY5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhga3Q91XY5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhga3Q91XY5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga3Q91XY5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga3Q91XY5 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms