Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Pcdhga9Q91XX9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhga9Q91XX9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhga9Q91XX9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhga9Q91XX9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Pcdhga9Q91XX9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhga9Q91XX9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhga9Q91XX9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhga9Q91XX9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhga9Q91XX9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhga9Q91XX9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhga9Q91XX9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.8■□□□□ 0.76
Pcdhga9Q91XX9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.8■□□□□ 0.76
Pcdhga9Q91XX9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhga9Q91XX9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhga9Q91XX9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhga9Q91XX9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhga9Q91XX9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhga9Q91XX9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhga9Q91XX9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhga9Q91XX9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhga9Q91XX9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhga9Q91XX9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga9Q91XX9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga9Q91XX9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga9Q91XX9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
Pcdhga9Q91XX9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga9Q91XX9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga9Q91XX9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhga9Q91XX9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga9Q91XX9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga9Q91XX9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhga9Q91XX9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Pcdhga9Q91XX9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhga9Q91XX9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhga9Q91XX9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhga9Q91XX9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhga9Q91XX9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhga9Q91XX9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga9Q91XX9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga9Q91XX9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.77■□□□□ 0.76
Pcdhga9Q91XX9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga9Q91XX9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga9Q91XX9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga9Q91XX9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga9Q91XX9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga9Q91XX9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga9Q91XX9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.77■□□□□ 0.76
Pcdhga9Q91XX9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga9Q91XX9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga9Q91XX9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga9Q91XX9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhga9Q91XX9 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.76■□□□□ 0.75
Pcdhga9Q91XX9 Mir6236-201ENSMUST00000184437 123 ntBASIC19.76■□□□□ 0.75
Pcdhga9Q91XX9 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.76■□□□□ 0.75
Pcdhga9Q91XX9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga9Q91XX9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Pcdhga9Q91XX9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga9Q91XX9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga9Q91XX9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.75■□□□□ 0.75
Pcdhga9Q91XX9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga9Q91XX9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga9Q91XX9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhga9Q91XX9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga9Q91XX9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga9Q91XX9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga9Q91XX9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga9Q91XX9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga9Q91XX9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga9Q91XX9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhga9Q91XX9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga9Q91XX9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Pcdhga9Q91XX9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga9Q91XX9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga9Q91XX9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.73■□□□□ 0.75
Pcdhga9Q91XX9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga9Q91XX9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.73■□□□□ 0.75
Pcdhga9Q91XX9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga9Q91XX9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga9Q91XX9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga9Q91XX9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga9Q91XX9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga9Q91XX9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga9Q91XX9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga9Q91XX9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pcdhga9Q91XX9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhga9Q91XX9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdhga9Q91XX9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga9Q91XX9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhga9Q91XX9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.71■□□□□ 0.75
Pcdhga9Q91XX9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga9Q91XX9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga9Q91XX9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga9Q91XX9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga9Q91XX9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga9Q91XX9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhga9Q91XX9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdhga9Q91XX9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga9Q91XX9 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.7■□□□□ 0.74
Pcdhga9Q91XX9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms