Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.8■□□□□ 0.92
Pcdhgb1Q91XX8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb1Q91XX8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb1Q91XX8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb1Q91XX8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb1Q91XX8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhgb1Q91XX8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb1Q91XX8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb1Q91XX8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb1Q91XX8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcdhgb1Q91XX8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgb1Q91XX8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Pcdhgb1Q91XX8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Pcdhgb1Q91XX8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgb1Q91XX8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.79■□□□□ 0.92
Pcdhgb1Q91XX8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgb1Q91XX8 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.79■□□□□ 0.92
Pcdhgb1Q91XX8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.79■□□□□ 0.92
Pcdhgb1Q91XX8 Spcs1-204ENSMUST00000226782 949 ntBASIC20.79■□□□□ 0.92
Pcdhgb1Q91XX8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgb1Q91XX8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgb1Q91XX8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgb1Q91XX8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgb1Q91XX8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
Pcdhgb1Q91XX8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.79■□□□□ 0.92
Pcdhgb1Q91XX8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgb1Q91XX8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhgb1Q91XX8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgb1Q91XX8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgb1Q91XX8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgb1Q91XX8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgb1Q91XX8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgb1Q91XX8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgb1Q91XX8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.78■□□□□ 0.92
Pcdhgb1Q91XX8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgb1Q91XX8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgb1Q91XX8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Pcdhgb1Q91XX8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.77■□□□□ 0.92
Pcdhgb1Q91XX8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Pcdhgb1Q91XX8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhgb1Q91XX8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Pcdhgb1Q91XX8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgb1Q91XX8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgb1Q91XX8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgb1Q91XX8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgb1Q91XX8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgb1Q91XX8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgb1Q91XX8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgb1Q91XX8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgb1Q91XX8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgb1Q91XX8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgb1Q91XX8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgb1Q91XX8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgb1Q91XX8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgb1Q91XX8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Pcdhgb1Q91XX8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.75■□□□□ 0.91
Pcdhgb1Q91XX8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
Pcdhgb1Q91XX8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgb1Q91XX8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgb1Q91XX8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgb1Q91XX8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgb1Q91XX8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgb1Q91XX8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgb1Q91XX8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgb1Q91XX8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgb1Q91XX8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdhgb1Q91XX8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgb1Q91XX8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgb1Q91XX8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Pcdhgb1Q91XX8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.74■□□□□ 0.91
Pcdhgb1Q91XX8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Pcdhgb1Q91XX8 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.74■□□□□ 0.91
Pcdhgb1Q91XX8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhgb1Q91XX8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhgb1Q91XX8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhgb1Q91XX8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.73■□□□□ 0.91
Pcdhgb1Q91XX8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.73■□□□□ 0.91
Pcdhgb1Q91XX8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.73■□□□□ 0.91
Pcdhgb1Q91XX8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhgb1Q91XX8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhgb1Q91XX8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhgb1Q91XX8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhgb1Q91XX8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhgb1Q91XX8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
Pcdhgb1Q91XX8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Pcdhgb1Q91XX8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Pcdhgb1Q91XX8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.72■□□□□ 0.91
Pcdhgb1Q91XX8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhgb1Q91XX8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.71■□□□□ 0.91
Pcdhgb1Q91XX8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhgb1Q91XX8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhgb1Q91XX8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.71■□□□□ 0.91
Pcdhgb1Q91XX8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhgb1Q91XX8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Pcdhgb1Q91XX8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Pcdhgb1Q91XX8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhgb1Q91XX8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhgb1Q91XX8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhgb1Q91XX8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhgb1Q91XX8 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms