Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb11Q91UZ8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.52■□□□□ 0.88
Pcdhb11Q91UZ8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb11Q91UZ8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb11Q91UZ8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb11Q91UZ8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb11Q91UZ8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb11Q91UZ8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb11Q91UZ8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhb11Q91UZ8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb11Q91UZ8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.51■□□□□ 0.87
Pcdhb11Q91UZ8 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.51■□□□□ 0.87
Pcdhb11Q91UZ8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhb11Q91UZ8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb11Q91UZ8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcdhb11Q91UZ8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb11Q91UZ8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb11Q91UZ8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhb11Q91UZ8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb11Q91UZ8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhb11Q91UZ8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.5■□□□□ 0.87
Pcdhb11Q91UZ8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb11Q91UZ8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb11Q91UZ8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Pcdhb11Q91UZ8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb11Q91UZ8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb11Q91UZ8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb11Q91UZ8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb11Q91UZ8 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.48■□□□□ 0.87
Pcdhb11Q91UZ8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.48■□□□□ 0.87
Pcdhb11Q91UZ8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb11Q91UZ8 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.48■□□□□ 0.87
Pcdhb11Q91UZ8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb11Q91UZ8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.48■□□□□ 0.87
Pcdhb11Q91UZ8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb11Q91UZ8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb11Q91UZ8 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.48■□□□□ 0.87
Pcdhb11Q91UZ8 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.48■□□□□ 0.87
Pcdhb11Q91UZ8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhb11Q91UZ8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhb11Q91UZ8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb11Q91UZ8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb11Q91UZ8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb11Q91UZ8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb11Q91UZ8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb11Q91UZ8 Mir6236-201ENSMUST00000184437 123 ntBASIC20.47■□□□□ 0.87
Pcdhb11Q91UZ8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb11Q91UZ8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb11Q91UZ8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb11Q91UZ8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb11Q91UZ8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb11Q91UZ8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb11Q91UZ8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Pcdhb11Q91UZ8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb11Q91UZ8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb11Q91UZ8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb11Q91UZ8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb11Q91UZ8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.45■□□□□ 0.86
Pcdhb11Q91UZ8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb11Q91UZ8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb11Q91UZ8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb11Q91UZ8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb11Q91UZ8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.44■□□□□ 0.86
Pcdhb11Q91UZ8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb11Q91UZ8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb11Q91UZ8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb11Q91UZ8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb11Q91UZ8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.44■□□□□ 0.86
Pcdhb11Q91UZ8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb11Q91UZ8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb11Q91UZ8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb11Q91UZ8 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.44■□□□□ 0.86
Pcdhb11Q91UZ8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb11Q91UZ8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb11Q91UZ8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb11Q91UZ8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb11Q91UZ8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pcdhb11Q91UZ8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb11Q91UZ8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pcdhb11Q91UZ8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb11Q91UZ8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdhb11Q91UZ8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb11Q91UZ8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb11Q91UZ8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Pcdhb11Q91UZ8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb11Q91UZ8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb11Q91UZ8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pcdhb11Q91UZ8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb11Q91UZ8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb11Q91UZ8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb11Q91UZ8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb11Q91UZ8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb11Q91UZ8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb11Q91UZ8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb11Q91UZ8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.42■□□□□ 0.86
Pcdhb11Q91UZ8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb11Q91UZ8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb11Q91UZ8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb11Q91UZ8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb11Q91UZ8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms