Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lmcd1Q8VEE1 Gm10812-201ENSMUST00000099864 546 ntBASIC21.53■■□□□ 1.04
Lmcd1Q8VEE1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lmcd1Q8VEE1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Lmcd1Q8VEE1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lmcd1Q8VEE1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lmcd1Q8VEE1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lmcd1Q8VEE1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.53■■□□□ 1.04
Lmcd1Q8VEE1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
Lmcd1Q8VEE1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Lmcd1Q8VEE1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Lmcd1Q8VEE1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lmcd1Q8VEE1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lmcd1Q8VEE1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lmcd1Q8VEE1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.51■■□□□ 1.03
Lmcd1Q8VEE1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.51■■□□□ 1.03
Lmcd1Q8VEE1 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.51■■□□□ 1.03
Lmcd1Q8VEE1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Lmcd1Q8VEE1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lmcd1Q8VEE1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Lmcd1Q8VEE1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Gm7290-201ENSMUST00000104990 617 ntBASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Gm12918-201ENSMUST00000120234 636 ntBASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Gm15710-201ENSMUST00000121821 636 ntBASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Gm5075-201ENSMUST00000196916 622 ntBASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lmcd1Q8VEE1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lmcd1Q8VEE1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lmcd1Q8VEE1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Lmcd1Q8VEE1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lmcd1Q8VEE1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lmcd1Q8VEE1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.49■■□□□ 1.03
Lmcd1Q8VEE1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lmcd1Q8VEE1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.49■■□□□ 1.03
Lmcd1Q8VEE1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Lmcd1Q8VEE1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Lmcd1Q8VEE1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lmcd1Q8VEE1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.48■■□□□ 1.03
Lmcd1Q8VEE1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lmcd1Q8VEE1 Gm20049-201ENSMUST00000219950 730 ntBASIC21.48■■□□□ 1.03
Lmcd1Q8VEE1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.48■■□□□ 1.03
Lmcd1Q8VEE1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lmcd1Q8VEE1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Lmcd1Q8VEE1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Lmcd1Q8VEE1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Lmcd1Q8VEE1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lmcd1Q8VEE1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Lmcd1Q8VEE1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lmcd1Q8VEE1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lmcd1Q8VEE1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lmcd1Q8VEE1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lmcd1Q8VEE1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lmcd1Q8VEE1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
Lmcd1Q8VEE1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Lmcd1Q8VEE1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lmcd1Q8VEE1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.46■■□□□ 1.03
Lmcd1Q8VEE1 Mir6982-201ENSMUST00000184354 68 ntBASIC21.46■■□□□ 1.03
Lmcd1Q8VEE1 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.46■■□□□ 1.03
Lmcd1Q8VEE1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lmcd1Q8VEE1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lmcd1Q8VEE1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lmcd1Q8VEE1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Lmcd1Q8VEE1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lmcd1Q8VEE1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lmcd1Q8VEE1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lmcd1Q8VEE1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lmcd1Q8VEE1 Gm13148-201ENSMUST00000118892 745 ntBASIC21.45■■□□□ 1.02
Lmcd1Q8VEE1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lmcd1Q8VEE1 Gm5408-201ENSMUST00000197998 747 ntBASIC21.45■■□□□ 1.02
Lmcd1Q8VEE1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.45■■□□□ 1.02
Lmcd1Q8VEE1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lmcd1Q8VEE1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.45■■□□□ 1.02
Lmcd1Q8VEE1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lmcd1Q8VEE1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lmcd1Q8VEE1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lmcd1Q8VEE1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lmcd1Q8VEE1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lmcd1Q8VEE1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.44■■□□□ 1.02
Lmcd1Q8VEE1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lmcd1Q8VEE1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lmcd1Q8VEE1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Lmcd1Q8VEE1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lmcd1Q8VEE1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lmcd1Q8VEE1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Lmcd1Q8VEE1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lmcd1Q8VEE1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lmcd1Q8VEE1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms