Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkd2Q8VE28 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkd2Q8VE28 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkd2Q8VE28 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkd2Q8VE28 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkd2Q8VE28 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkd2Q8VE28 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nkd2Q8VE28 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkd2Q8VE28 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Nkd2Q8VE28 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.16■□□□□ 0.5
Nkd2Q8VE28 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkd2Q8VE28 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkd2Q8VE28 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkd2Q8VE28 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nkd2Q8VE28 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nkd2Q8VE28 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nkd2Q8VE28 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkd2Q8VE28 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkd2Q8VE28 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkd2Q8VE28 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nkd2Q8VE28 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nkd2Q8VE28 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Nkd2Q8VE28 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkd2Q8VE28 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkd2Q8VE28 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkd2Q8VE28 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkd2Q8VE28 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkd2Q8VE28 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.15■□□□□ 0.5
Nkd2Q8VE28 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Nkd2Q8VE28 Iqck-206ENSMUST00000208658 2891 ntBASIC18.14■□□□□ 0.49
Nkd2Q8VE28 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Nkd2Q8VE28 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Nkd2Q8VE28 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nkd2Q8VE28 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Nkd2Q8VE28 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkd2Q8VE28 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkd2Q8VE28 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkd2Q8VE28 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.13■□□□□ 0.49
Nkd2Q8VE28 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkd2Q8VE28 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Nkd2Q8VE28 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkd2Q8VE28 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.13■□□□□ 0.49
Nkd2Q8VE28 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkd2Q8VE28 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Nkd2Q8VE28 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkd2Q8VE28 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.12■□□□□ 0.49
Nkd2Q8VE28 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkd2Q8VE28 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nkd2Q8VE28 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkd2Q8VE28 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkd2Q8VE28 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkd2Q8VE28 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkd2Q8VE28 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Nkd2Q8VE28 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkd2Q8VE28 Gm9870-201ENSMUST00000063874 645 ntBASIC18.12■□□□□ 0.49
Nkd2Q8VE28 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nkd2Q8VE28 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkd2Q8VE28 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Nkd2Q8VE28 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Nkd2Q8VE28 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nkd2Q8VE28 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkd2Q8VE28 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkd2Q8VE28 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nkd2Q8VE28 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkd2Q8VE28 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkd2Q8VE28 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nkd2Q8VE28 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.11■□□□□ 0.49
Nkd2Q8VE28 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nkd2Q8VE28 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkd2Q8VE28 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkd2Q8VE28 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkd2Q8VE28 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkd2Q8VE28 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nkd2Q8VE28 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Nkd2Q8VE28 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkd2Q8VE28 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkd2Q8VE28 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkd2Q8VE28 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkd2Q8VE28 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.1■□□□□ 0.49
Nkd2Q8VE28 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Nkd2Q8VE28 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.1■□□□□ 0.49
Nkd2Q8VE28 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.1■□□□□ 0.49
Nkd2Q8VE28 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkd2Q8VE28 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkd2Q8VE28 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkd2Q8VE28 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkd2Q8VE28 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkd2Q8VE28 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkd2Q8VE28 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
Nkd2Q8VE28 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Nkd2Q8VE28 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkd2Q8VE28 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkd2Q8VE28 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkd2Q8VE28 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Nkd2Q8VE28 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkd2Q8VE28 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkd2Q8VE28 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.09■□□□□ 0.49
Nkd2Q8VE28 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Nkd2Q8VE28 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkd2Q8VE28 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms