Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Cdt1Q8R4E9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdt1Q8R4E9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Cdt1Q8R4E9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cdt1Q8R4E9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdt1Q8R4E9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cdt1Q8R4E9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdt1Q8R4E9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdt1Q8R4E9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdt1Q8R4E9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdt1Q8R4E9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdt1Q8R4E9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdt1Q8R4E9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Cdt1Q8R4E9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdt1Q8R4E9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdt1Q8R4E9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdt1Q8R4E9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.31■□□□□ 0.68
Cdt1Q8R4E9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cdt1Q8R4E9 Gm43137-201ENSMUST00000198052 594 ntBASIC19.31■□□□□ 0.68
Cdt1Q8R4E9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cdt1Q8R4E9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.31■□□□□ 0.68
Cdt1Q8R4E9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdt1Q8R4E9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdt1Q8R4E9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdt1Q8R4E9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdt1Q8R4E9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdt1Q8R4E9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cdt1Q8R4E9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.3■□□□□ 0.68
Cdt1Q8R4E9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Cdt1Q8R4E9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.3■□□□□ 0.68
Cdt1Q8R4E9 Gm43017-201ENSMUST00000198296 752 ntBASIC19.3■□□□□ 0.68
Cdt1Q8R4E9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.3■□□□□ 0.68
Cdt1Q8R4E9 Gm7143-201ENSMUST00000222811 859 ntBASIC19.3■□□□□ 0.68
Cdt1Q8R4E9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdt1Q8R4E9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cdt1Q8R4E9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
Cdt1Q8R4E9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdt1Q8R4E9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdt1Q8R4E9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdt1Q8R4E9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdt1Q8R4E9 Mir7075-201ENSMUST00000184187 82 ntBASIC19.29■□□□□ 0.68
Cdt1Q8R4E9 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.29■□□□□ 0.68
Cdt1Q8R4E9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdt1Q8R4E9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdt1Q8R4E9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdt1Q8R4E9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdt1Q8R4E9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdt1Q8R4E9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdt1Q8R4E9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdt1Q8R4E9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cdt1Q8R4E9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdt1Q8R4E9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdt1Q8R4E9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.28■□□□□ 0.68
Cdt1Q8R4E9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.28■□□□□ 0.68
Cdt1Q8R4E9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
Cdt1Q8R4E9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdt1Q8R4E9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdt1Q8R4E9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdt1Q8R4E9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdt1Q8R4E9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cdt1Q8R4E9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdt1Q8R4E9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cdt1Q8R4E9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdt1Q8R4E9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.27■□□□□ 0.68
Cdt1Q8R4E9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdt1Q8R4E9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdt1Q8R4E9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdt1Q8R4E9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cdt1Q8R4E9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdt1Q8R4E9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cdt1Q8R4E9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdt1Q8R4E9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.27■□□□□ 0.68
Cdt1Q8R4E9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdt1Q8R4E9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdt1Q8R4E9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Cdt1Q8R4E9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdt1Q8R4E9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Cdt1Q8R4E9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdt1Q8R4E9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdt1Q8R4E9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Cdt1Q8R4E9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdt1Q8R4E9 Gm5874-201ENSMUST00000096101 508 ntBASIC19.26■□□□□ 0.67
Cdt1Q8R4E9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cdt1Q8R4E9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdt1Q8R4E9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdt1Q8R4E9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdt1Q8R4E9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Cdt1Q8R4E9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdt1Q8R4E9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdt1Q8R4E9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdt1Q8R4E9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdt1Q8R4E9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.25■□□□□ 0.67
Cdt1Q8R4E9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdt1Q8R4E9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdt1Q8R4E9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdt1Q8R4E9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdt1Q8R4E9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdt1Q8R4E9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cdt1Q8R4E9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cdt1Q8R4E9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms