Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vopp1Q8R1C3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.63■■□□□ 1.05
Vopp1Q8R1C3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vopp1Q8R1C3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vopp1Q8R1C3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Vopp1Q8R1C3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vopp1Q8R1C3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vopp1Q8R1C3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vopp1Q8R1C3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vopp1Q8R1C3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Vopp1Q8R1C3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vopp1Q8R1C3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Vopp1Q8R1C3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vopp1Q8R1C3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Vopp1Q8R1C3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vopp1Q8R1C3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vopp1Q8R1C3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vopp1Q8R1C3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Vopp1Q8R1C3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vopp1Q8R1C3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vopp1Q8R1C3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.61■■□□□ 1.05
Vopp1Q8R1C3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vopp1Q8R1C3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vopp1Q8R1C3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vopp1Q8R1C3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vopp1Q8R1C3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vopp1Q8R1C3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vopp1Q8R1C3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Vopp1Q8R1C3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.61■■□□□ 1.05
Vopp1Q8R1C3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vopp1Q8R1C3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vopp1Q8R1C3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Vopp1Q8R1C3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Vopp1Q8R1C3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.6■■□□□ 1.05
Vopp1Q8R1C3 Gm10033-202ENSMUST00000211874 928 ntBASIC21.6■■□□□ 1.05
Vopp1Q8R1C3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vopp1Q8R1C3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vopp1Q8R1C3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Vopp1Q8R1C3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Vopp1Q8R1C3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Vopp1Q8R1C3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.59■■□□□ 1.05
Vopp1Q8R1C3 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.59■■□□□ 1.05
Vopp1Q8R1C3 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.59■■□□□ 1.05
Vopp1Q8R1C3 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.59■■□□□ 1.05
Vopp1Q8R1C3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.59■■□□□ 1.05
Vopp1Q8R1C3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vopp1Q8R1C3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.58■■□□□ 1.05
Vopp1Q8R1C3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vopp1Q8R1C3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.58■■□□□ 1.05
Vopp1Q8R1C3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Vopp1Q8R1C3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Vopp1Q8R1C3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vopp1Q8R1C3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vopp1Q8R1C3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vopp1Q8R1C3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Vopp1Q8R1C3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Vopp1Q8R1C3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Vopp1Q8R1C3 Gm7291-201ENSMUST00000199147 382 ntBASIC21.57■■□□□ 1.04
Vopp1Q8R1C3 Gm42642-201ENSMUST00000200683 355 ntBASIC21.57■■□□□ 1.04
Vopp1Q8R1C3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.57■■□□□ 1.04
Vopp1Q8R1C3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Vopp1Q8R1C3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Vopp1Q8R1C3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vopp1Q8R1C3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vopp1Q8R1C3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Vopp1Q8R1C3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.56■■□□□ 1.04
Vopp1Q8R1C3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vopp1Q8R1C3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.56■■□□□ 1.04
Vopp1Q8R1C3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vopp1Q8R1C3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vopp1Q8R1C3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vopp1Q8R1C3 Gm11421-201ENSMUST00000122124 294 ntBASIC21.55■■□□□ 1.04
Vopp1Q8R1C3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vopp1Q8R1C3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vopp1Q8R1C3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vopp1Q8R1C3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vopp1Q8R1C3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vopp1Q8R1C3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vopp1Q8R1C3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vopp1Q8R1C3 Gm27405-201ENSMUST00000184201 112 ntBASIC21.54■■□□□ 1.04
Vopp1Q8R1C3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.54■■□□□ 1.04
Vopp1Q8R1C3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.54■■□□□ 1.04
Vopp1Q8R1C3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vopp1Q8R1C3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.54■■□□□ 1.04
Vopp1Q8R1C3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vopp1Q8R1C3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vopp1Q8R1C3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Vopp1Q8R1C3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vopp1Q8R1C3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vopp1Q8R1C3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vopp1Q8R1C3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Vopp1Q8R1C3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vopp1Q8R1C3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vopp1Q8R1C3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Vopp1Q8R1C3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.52■■□□□ 1.04
Vopp1Q8R1C3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vopp1Q8R1C3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vopp1Q8R1C3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vopp1Q8R1C3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vopp1Q8R1C3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms