Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx54Q8K4L0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx54Q8K4L0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Ddx54Q8K4L0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx54Q8K4L0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx54Q8K4L0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ddx54Q8K4L0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ddx54Q8K4L0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Gm13148-201ENSMUST00000118892 745 ntBASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx54Q8K4L0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx54Q8K4L0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC26.56■■□□□ 1.84
Ddx54Q8K4L0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx54Q8K4L0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx54Q8K4L0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx54Q8K4L0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx54Q8K4L0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ddx54Q8K4L0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ddx54Q8K4L0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC26.55■■□□□ 1.84
Ddx54Q8K4L0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC26.55■■□□□ 1.84
Ddx54Q8K4L0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Ddx54Q8K4L0 AC135637.1-201ENSMUST00000227750 365 ntBASIC26.55■■□□□ 1.84
Ddx54Q8K4L0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ddx54Q8K4L0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC26.55■■□□□ 1.84
Ddx54Q8K4L0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ddx54Q8K4L0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Ddx54Q8K4L0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.54■■□□□ 1.84
Ddx54Q8K4L0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC26.54■■□□□ 1.84
Ddx54Q8K4L0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
Ddx54Q8K4L0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Ddx54Q8K4L0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ddx54Q8K4L0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ddx54Q8K4L0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ddx54Q8K4L0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC26.53■■□□□ 1.84
Ddx54Q8K4L0 Gm20049-201ENSMUST00000219950 730 ntBASIC26.53■■□□□ 1.84
Ddx54Q8K4L0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Ddx54Q8K4L0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ddx54Q8K4L0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ddx54Q8K4L0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ddx54Q8K4L0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC26.52■■□□□ 1.84
Ddx54Q8K4L0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC26.52■■□□□ 1.84
Ddx54Q8K4L0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ddx54Q8K4L0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx54Q8K4L0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx54Q8K4L0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC26.51■■□□□ 1.83
Ddx54Q8K4L0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC26.51■■□□□ 1.83
Ddx54Q8K4L0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC26.51■■□□□ 1.83
Ddx54Q8K4L0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx54Q8K4L0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx54Q8K4L0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx54Q8K4L0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ddx54Q8K4L0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ddx54Q8K4L0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Ddx54Q8K4L0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ddx54Q8K4L0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ddx54Q8K4L0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ddx54Q8K4L0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC26.49■■□□□ 1.83
Ddx54Q8K4L0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC26.49■■□□□ 1.83
Ddx54Q8K4L0 Gm6365-201ENSMUST00000054711 744 ntBASIC26.49■■□□□ 1.83
Ddx54Q8K4L0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ddx54Q8K4L0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
Ddx54Q8K4L0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ddx54Q8K4L0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Ddx54Q8K4L0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC26.48■■□□□ 1.83
Ddx54Q8K4L0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC26.48■■□□□ 1.83
Ddx54Q8K4L0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC26.48■■□□□ 1.83
Ddx54Q8K4L0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ddx54Q8K4L0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ddx54Q8K4L0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.47■■□□□ 1.83
Ddx54Q8K4L0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Ddx54Q8K4L0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Ddx54Q8K4L0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC26.47■■□□□ 1.83
Ddx54Q8K4L0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx54Q8K4L0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx54Q8K4L0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx54Q8K4L0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx54Q8K4L0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx54Q8K4L0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC26.46■■□□□ 1.83
Ddx54Q8K4L0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Ddx54Q8K4L0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ddx54Q8K4L0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Ddx54Q8K4L0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Ddx54Q8K4L0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ddx54Q8K4L0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
Ddx54Q8K4L0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Ddx54Q8K4L0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ddx54Q8K4L0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC26.44■■□□□ 1.82
Ddx54Q8K4L0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ddx54Q8K4L0 Gm13181-201ENSMUST00000120117 1069 ntBASIC26.44■■□□□ 1.82
Ddx54Q8K4L0 Gm37856-201ENSMUST00000191634 999 ntBASIC26.44■■□□□ 1.82
Ddx54Q8K4L0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms