Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx54Q8K4L0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx54Q8K4L0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Ddx54Q8K4L0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx54Q8K4L0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx54Q8K4L0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ddx54Q8K4L0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ddx54Q8K4L0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Gm13148-201ENSMUST00000118892 745 ntBASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx54Q8K4L0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx54Q8K4L0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx54Q8K4L0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC26.56■■□□□ 1.84
Ddx54Q8K4L0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx54Q8K4L0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx54Q8K4L0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx54Q8K4L0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx54Q8K4L0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ddx54Q8K4L0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ddx54Q8K4L0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC26.55■■□□□ 1.84
Ddx54Q8K4L0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC26.55■■□□□ 1.84
Ddx54Q8K4L0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Ddx54Q8K4L0 AC135637.1-201ENSMUST00000227750 365 ntBASIC26.55■■□□□ 1.84
Ddx54Q8K4L0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ddx54Q8K4L0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC26.55■■□□□ 1.84
Ddx54Q8K4L0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ddx54Q8K4L0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Ddx54Q8K4L0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.54■■□□□ 1.84
Ddx54Q8K4L0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC26.54■■□□□ 1.84
Ddx54Q8K4L0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
Ddx54Q8K4L0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Ddx54Q8K4L0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ddx54Q8K4L0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ddx54Q8K4L0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ddx54Q8K4L0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC26.53■■□□□ 1.84
Ddx54Q8K4L0 Gm20049-201ENSMUST00000219950 730 ntBASIC26.53■■□□□ 1.84
Ddx54Q8K4L0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Ddx54Q8K4L0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ddx54Q8K4L0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ddx54Q8K4L0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ddx54Q8K4L0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC26.52■■□□□ 1.84
Ddx54Q8K4L0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC26.52■■□□□ 1.84
Ddx54Q8K4L0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ddx54Q8K4L0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx54Q8K4L0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx54Q8K4L0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC26.51■■□□□ 1.83
Ddx54Q8K4L0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC26.51■■□□□ 1.83
Ddx54Q8K4L0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC26.51■■□□□ 1.83
Ddx54Q8K4L0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx54Q8K4L0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx54Q8K4L0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx54Q8K4L0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ddx54Q8K4L0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ddx54Q8K4L0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Ddx54Q8K4L0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ddx54Q8K4L0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ddx54Q8K4L0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ddx54Q8K4L0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC26.49■■□□□ 1.83
Ddx54Q8K4L0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC26.49■■□□□ 1.83
Ddx54Q8K4L0 Gm6365-201ENSMUST00000054711 744 ntBASIC26.49■■□□□ 1.83
Ddx54Q8K4L0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ddx54Q8K4L0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
Ddx54Q8K4L0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ddx54Q8K4L0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Ddx54Q8K4L0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC26.48■■□□□ 1.83
Ddx54Q8K4L0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC26.48■■□□□ 1.83
Ddx54Q8K4L0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC26.48■■□□□ 1.83
Ddx54Q8K4L0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ddx54Q8K4L0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ddx54Q8K4L0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.47■■□□□ 1.83
Ddx54Q8K4L0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Ddx54Q8K4L0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Ddx54Q8K4L0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC26.47■■□□□ 1.83
Ddx54Q8K4L0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx54Q8K4L0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx54Q8K4L0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx54Q8K4L0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx54Q8K4L0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx54Q8K4L0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC26.46■■□□□ 1.83
Ddx54Q8K4L0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Ddx54Q8K4L0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ddx54Q8K4L0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Ddx54Q8K4L0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Ddx54Q8K4L0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ddx54Q8K4L0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
Ddx54Q8K4L0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Ddx54Q8K4L0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ddx54Q8K4L0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC26.44■■□□□ 1.82
Ddx54Q8K4L0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ddx54Q8K4L0 Gm13181-201ENSMUST00000120117 1069 ntBASIC26.44■■□□□ 1.82
Ddx54Q8K4L0 Gm37856-201ENSMUST00000191634 999 ntBASIC26.44■■□□□ 1.82
Ddx54Q8K4L0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms