Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Col23a1Q8K4G2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
Col23a1Q8K4G2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Col23a1Q8K4G2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Col23a1Q8K4G2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Col23a1Q8K4G2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Col23a1Q8K4G2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC24.82■■□□□ 1.56
Col23a1Q8K4G2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Col23a1Q8K4G2 AC135963.1-201ENSMUST00000211640 717 ntBASIC24.82■■□□□ 1.56
Col23a1Q8K4G2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Col23a1Q8K4G2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Col23a1Q8K4G2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Col23a1Q8K4G2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Col23a1Q8K4G2 Gm20049-201ENSMUST00000219950 730 ntBASIC24.81■■□□□ 1.56
Col23a1Q8K4G2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Col23a1Q8K4G2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Col23a1Q8K4G2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Col23a1Q8K4G2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC24.8■■□□□ 1.56
Col23a1Q8K4G2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC24.8■■□□□ 1.56
Col23a1Q8K4G2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Col23a1Q8K4G2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col23a1Q8K4G2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col23a1Q8K4G2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col23a1Q8K4G2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col23a1Q8K4G2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC24.8■■□□□ 1.56
Col23a1Q8K4G2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col23a1Q8K4G2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col23a1Q8K4G2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC24.79■■□□□ 1.56
Col23a1Q8K4G2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col23a1Q8K4G2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC24.79■■□□□ 1.56
Col23a1Q8K4G2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Col23a1Q8K4G2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC24.79■■□□□ 1.56
Col23a1Q8K4G2 Gm5408-201ENSMUST00000197998 747 ntBASIC24.79■■□□□ 1.56
Col23a1Q8K4G2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC24.79■■□□□ 1.56
Col23a1Q8K4G2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col23a1Q8K4G2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col23a1Q8K4G2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Col23a1Q8K4G2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC24.78■■□□□ 1.56
Col23a1Q8K4G2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col23a1Q8K4G2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC24.77■■□□□ 1.56
Col23a1Q8K4G2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC24.77■■□□□ 1.56
Col23a1Q8K4G2 Mir6982-201ENSMUST00000184354 68 ntBASIC24.77■■□□□ 1.56
Col23a1Q8K4G2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC24.77■■□□□ 1.56
Col23a1Q8K4G2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Col23a1Q8K4G2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Col23a1Q8K4G2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Col23a1Q8K4G2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Col23a1Q8K4G2 AC135637.1-201ENSMUST00000227750 365 ntBASIC24.76■■□□□ 1.55
Col23a1Q8K4G2 Gm10812-201ENSMUST00000099864 546 ntBASIC24.76■■□□□ 1.55
Col23a1Q8K4G2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Col23a1Q8K4G2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Col23a1Q8K4G2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col23a1Q8K4G2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC24.75■■□□□ 1.55
Col23a1Q8K4G2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Col23a1Q8K4G2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Col23a1Q8K4G2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC24.75■■□□□ 1.55
Col23a1Q8K4G2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col23a1Q8K4G2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col23a1Q8K4G2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col23a1Q8K4G2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col23a1Q8K4G2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Col23a1Q8K4G2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Col23a1Q8K4G2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col23a1Q8K4G2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col23a1Q8K4G2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC24.73■■□□□ 1.55
Col23a1Q8K4G2 Gm6365-201ENSMUST00000054711 744 ntBASIC24.73■■□□□ 1.55
Col23a1Q8K4G2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Col23a1Q8K4G2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col23a1Q8K4G2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col23a1Q8K4G2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC24.72■■□□□ 1.55
Col23a1Q8K4G2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
Col23a1Q8K4G2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
Col23a1Q8K4G2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col23a1Q8K4G2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC24.72■■□□□ 1.55
Col23a1Q8K4G2 Gm37856-201ENSMUST00000191634 999 ntBASIC24.72■■□□□ 1.55
Col23a1Q8K4G2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Col23a1Q8K4G2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
Col23a1Q8K4G2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Col23a1Q8K4G2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col23a1Q8K4G2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Col23a1Q8K4G2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col23a1Q8K4G2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC24.71■■□□□ 1.55
Col23a1Q8K4G2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC24.71■■□□□ 1.55
Col23a1Q8K4G2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col23a1Q8K4G2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Col23a1Q8K4G2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Col23a1Q8K4G2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC24.7■■□□□ 1.54
Col23a1Q8K4G2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Col23a1Q8K4G2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Col23a1Q8K4G2 Gm7290-201ENSMUST00000104990 617 ntBASIC24.7■■□□□ 1.54
Col23a1Q8K4G2 Gm12918-201ENSMUST00000120234 636 ntBASIC24.7■■□□□ 1.54
Col23a1Q8K4G2 Gm15710-201ENSMUST00000121821 636 ntBASIC24.7■■□□□ 1.54
Col23a1Q8K4G2 Mir6236-201ENSMUST00000184437 123 ntBASIC24.7■■□□□ 1.54
Col23a1Q8K4G2 Gm5075-201ENSMUST00000196916 622 ntBASIC24.7■■□□□ 1.54
Col23a1Q8K4G2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Col23a1Q8K4G2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC24.7■■□□□ 1.54
Col23a1Q8K4G2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC24.7■■□□□ 1.54
Col23a1Q8K4G2 Gm42418-201ENSMUST00000182010 1831 ntBASIC24.7■■□□□ 1.54
Col23a1Q8K4G2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
Col23a1Q8K4G2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms