Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clrn1Q8K445 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Clrn1Q8K445 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.87■□□□□ 0.61
Clrn1Q8K445 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clrn1Q8K445 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn1Q8K445 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn1Q8K445 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn1Q8K445 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn1Q8K445 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn1Q8K445 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn1Q8K445 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn1Q8K445 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn1Q8K445 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.86■□□□□ 0.61
Clrn1Q8K445 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn1Q8K445 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Clrn1Q8K445 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn1Q8K445 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Clrn1Q8K445 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn1Q8K445 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn1Q8K445 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clrn1Q8K445 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.85■□□□□ 0.61
Clrn1Q8K445 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn1Q8K445 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn1Q8K445 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.85■□□□□ 0.61
Clrn1Q8K445 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.85■□□□□ 0.61
Clrn1Q8K445 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.85■□□□□ 0.61
Clrn1Q8K445 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn1Q8K445 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn1Q8K445 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn1Q8K445 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clrn1Q8K445 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn1Q8K445 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn1Q8K445 Gm12922-201ENSMUST00000120626 809 ntBASIC18.84■□□□□ 0.61
Clrn1Q8K445 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.84■□□□□ 0.61
Clrn1Q8K445 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn1Q8K445 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clrn1Q8K445 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.84■□□□□ 0.61
Clrn1Q8K445 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Clrn1Q8K445 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clrn1Q8K445 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.83■□□□□ 0.61
Clrn1Q8K445 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clrn1Q8K445 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clrn1Q8K445 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clrn1Q8K445 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clrn1Q8K445 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn1Q8K445 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn1Q8K445 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn1Q8K445 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Clrn1Q8K445 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn1Q8K445 Golgb1-201ENSMUST00000023534 498 ntBASIC18.83■□□□□ 0.6
Clrn1Q8K445 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn1Q8K445 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn1Q8K445 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn1Q8K445 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn1Q8K445 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn1Q8K445 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn1Q8K445 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.82■□□□□ 0.6
Clrn1Q8K445 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Clrn1Q8K445 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn1Q8K445 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.82■□□□□ 0.6
Clrn1Q8K445 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn1Q8K445 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn1Q8K445 Gm9847-201ENSMUST00000052528 599 ntBASIC18.82■□□□□ 0.6
Clrn1Q8K445 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn1Q8K445 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn1Q8K445 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn1Q8K445 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn1Q8K445 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn1Q8K445 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn1Q8K445 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn1Q8K445 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.81■□□□□ 0.6
Clrn1Q8K445 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Clrn1Q8K445 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Clrn1Q8K445 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn1Q8K445 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn1Q8K445 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn1Q8K445 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn1Q8K445 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn1Q8K445 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn1Q8K445 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn1Q8K445 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn1Q8K445 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Clrn1Q8K445 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn1Q8K445 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Clrn1Q8K445 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn1Q8K445 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn1Q8K445 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn1Q8K445 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.79■□□□□ 0.6
Clrn1Q8K445 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn1Q8K445 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Clrn1Q8K445 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Clrn1Q8K445 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn1Q8K445 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn1Q8K445 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clrn1Q8K445 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clrn1Q8K445 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clrn1Q8K445 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clrn1Q8K445 Mir6236-201ENSMUST00000184437 123 ntBASIC18.78■□□□□ 0.6
Clrn1Q8K445 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clrn1Q8K445 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms