Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mrpl47Q8K2Y7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mrpl47Q8K2Y7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mrpl47Q8K2Y7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Mrpl47Q8K2Y7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mrpl47Q8K2Y7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Mrpl47Q8K2Y7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.84■□□□□ 0.77
Mrpl47Q8K2Y7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Mrpl47Q8K2Y7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.84■□□□□ 0.77
Mrpl47Q8K2Y7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mrpl47Q8K2Y7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mrpl47Q8K2Y7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mrpl47Q8K2Y7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mrpl47Q8K2Y7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.83■□□□□ 0.77
Mrpl47Q8K2Y7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mrpl47Q8K2Y7 Gm10232-201ENSMUST00000089221 720 ntBASIC19.83■□□□□ 0.77
Mrpl47Q8K2Y7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.83■□□□□ 0.76
Mrpl47Q8K2Y7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Mrpl47Q8K2Y7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mrpl47Q8K2Y7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mrpl47Q8K2Y7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Mrpl47Q8K2Y7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Mrpl47Q8K2Y7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Mrpl47Q8K2Y7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mrpl47Q8K2Y7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Mrpl47Q8K2Y7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Mrpl47Q8K2Y7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mrpl47Q8K2Y7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Mrpl47Q8K2Y7 Golph3-202ENSMUST00000226517 2359 ntBASIC19.81■□□□□ 0.76
Mrpl47Q8K2Y7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Mrpl47Q8K2Y7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Mrpl47Q8K2Y7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Mrpl47Q8K2Y7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Mrpl47Q8K2Y7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.81■□□□□ 0.76
Mrpl47Q8K2Y7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mrpl47Q8K2Y7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mrpl47Q8K2Y7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Mrpl47Q8K2Y7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.81■□□□□ 0.76
Mrpl47Q8K2Y7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mrpl47Q8K2Y7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mrpl47Q8K2Y7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mrpl47Q8K2Y7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mrpl47Q8K2Y7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mrpl47Q8K2Y7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mrpl47Q8K2Y7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Mrpl47Q8K2Y7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mrpl47Q8K2Y7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.8■□□□□ 0.76
Mrpl47Q8K2Y7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mrpl47Q8K2Y7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Mrpl47Q8K2Y7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Mrpl47Q8K2Y7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.8■□□□□ 0.76
Mrpl47Q8K2Y7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.8■□□□□ 0.76
Mrpl47Q8K2Y7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Mrpl47Q8K2Y7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mrpl47Q8K2Y7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Mrpl47Q8K2Y7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mrpl47Q8K2Y7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mrpl47Q8K2Y7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mrpl47Q8K2Y7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Mrpl47Q8K2Y7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mrpl47Q8K2Y7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mrpl47Q8K2Y7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mrpl47Q8K2Y7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mrpl47Q8K2Y7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mrpl47Q8K2Y7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mrpl47Q8K2Y7 Gm7143-201ENSMUST00000222811 859 ntBASIC19.78■□□□□ 0.76
Mrpl47Q8K2Y7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mrpl47Q8K2Y7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mrpl47Q8K2Y7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.78■□□□□ 0.76
Mrpl47Q8K2Y7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mrpl47Q8K2Y7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mrpl47Q8K2Y7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Mrpl47Q8K2Y7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mrpl47Q8K2Y7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mrpl47Q8K2Y7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mrpl47Q8K2Y7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mrpl47Q8K2Y7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.77■□□□□ 0.76
Mrpl47Q8K2Y7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Mrpl47Q8K2Y7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Mrpl47Q8K2Y7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mrpl47Q8K2Y7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Mrpl47Q8K2Y7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mrpl47Q8K2Y7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mrpl47Q8K2Y7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.76■□□□□ 0.75
Mrpl47Q8K2Y7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mrpl47Q8K2Y7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.75■□□□□ 0.75
Mrpl47Q8K2Y7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mrpl47Q8K2Y7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mrpl47Q8K2Y7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Mrpl47Q8K2Y7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.75■□□□□ 0.75
Mrpl47Q8K2Y7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Mrpl47Q8K2Y7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mrpl47Q8K2Y7 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.75■□□□□ 0.75
Mrpl47Q8K2Y7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mrpl47Q8K2Y7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Mrpl47Q8K2Y7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mrpl47Q8K2Y7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mrpl47Q8K2Y7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mrpl47Q8K2Y7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Mrpl47Q8K2Y7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms