Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Rfwd3Q8CIK8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfwd3Q8CIK8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfwd3Q8CIK8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfwd3Q8CIK8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.75■□□□□ 0.59
Rfwd3Q8CIK8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfwd3Q8CIK8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfwd3Q8CIK8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfwd3Q8CIK8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfwd3Q8CIK8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfwd3Q8CIK8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfwd3Q8CIK8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rfwd3Q8CIK8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rfwd3Q8CIK8 Gm21956-201ENSMUST00000179946 522 ntBASIC18.74■□□□□ 0.59
Rfwd3Q8CIK8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.74■□□□□ 0.59
Rfwd3Q8CIK8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rfwd3Q8CIK8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfwd3Q8CIK8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.74■□□□□ 0.59
Rfwd3Q8CIK8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfwd3Q8CIK8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfwd3Q8CIK8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rfwd3Q8CIK8 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.73■□□□□ 0.59
Rfwd3Q8CIK8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfwd3Q8CIK8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rfwd3Q8CIK8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfwd3Q8CIK8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.73■□□□□ 0.59
Rfwd3Q8CIK8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.73■□□□□ 0.59
Rfwd3Q8CIK8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rfwd3Q8CIK8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Rfwd3Q8CIK8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.73■□□□□ 0.59
Rfwd3Q8CIK8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd3Q8CIK8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd3Q8CIK8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd3Q8CIK8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd3Q8CIK8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.72■□□□□ 0.59
Rfwd3Q8CIK8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd3Q8CIK8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rfwd3Q8CIK8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.72■□□□□ 0.59
Rfwd3Q8CIK8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd3Q8CIK8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd3Q8CIK8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rfwd3Q8CIK8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rfwd3Q8CIK8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.71■□□□□ 0.59
Rfwd3Q8CIK8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfwd3Q8CIK8 Notumos-201ENSMUST00000151998 2659 ntBASIC18.71■□□□□ 0.59
Rfwd3Q8CIK8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfwd3Q8CIK8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfwd3Q8CIK8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.71■□□□□ 0.58
Rfwd3Q8CIK8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
Rfwd3Q8CIK8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfwd3Q8CIK8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfwd3Q8CIK8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfwd3Q8CIK8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfwd3Q8CIK8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfwd3Q8CIK8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfwd3Q8CIK8 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.7■□□□□ 0.58
Rfwd3Q8CIK8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfwd3Q8CIK8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.7■□□□□ 0.58
Rfwd3Q8CIK8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfwd3Q8CIK8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd3Q8CIK8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd3Q8CIK8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd3Q8CIK8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd3Q8CIK8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd3Q8CIK8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd3Q8CIK8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd3Q8CIK8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd3Q8CIK8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd3Q8CIK8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd3Q8CIK8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd3Q8CIK8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd3Q8CIK8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd3Q8CIK8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rfwd3Q8CIK8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfwd3Q8CIK8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfwd3Q8CIK8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfwd3Q8CIK8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfwd3Q8CIK8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rfwd3Q8CIK8 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.68■□□□□ 0.58
Rfwd3Q8CIK8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rfwd3Q8CIK8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfwd3Q8CIK8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rfwd3Q8CIK8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfwd3Q8CIK8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfwd3Q8CIK8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfwd3Q8CIK8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfwd3Q8CIK8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rfwd3Q8CIK8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.67■□□□□ 0.58
Rfwd3Q8CIK8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rfwd3Q8CIK8 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.67■□□□□ 0.58
Rfwd3Q8CIK8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfwd3Q8CIK8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.67■□□□□ 0.58
Rfwd3Q8CIK8 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.67■□□□□ 0.58
Rfwd3Q8CIK8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfwd3Q8CIK8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rfwd3Q8CIK8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.66■□□□□ 0.58
Rfwd3Q8CIK8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfwd3Q8CIK8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rfwd3Q8CIK8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfwd3Q8CIK8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms