Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Polr2bQ8CFI7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Polr2bQ8CFI7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Polr2bQ8CFI7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Polr2bQ8CFI7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Polr2bQ8CFI7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Polr2bQ8CFI7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.49■■□□□ 1.03
Polr2bQ8CFI7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.49■■□□□ 1.03
Polr2bQ8CFI7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Polr2bQ8CFI7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Polr2bQ8CFI7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Polr2bQ8CFI7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Polr2bQ8CFI7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Polr2bQ8CFI7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Polr2bQ8CFI7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Polr2bQ8CFI7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Polr2bQ8CFI7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Polr2bQ8CFI7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Polr2bQ8CFI7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Polr2bQ8CFI7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Polr2bQ8CFI7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Polr2bQ8CFI7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Polr2bQ8CFI7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Polr2bQ8CFI7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Polr2bQ8CFI7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Polr2bQ8CFI7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Polr2bQ8CFI7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Polr2bQ8CFI7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.46■■□□□ 1.03
Polr2bQ8CFI7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Polr2bQ8CFI7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Polr2bQ8CFI7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.46■■□□□ 1.03
Polr2bQ8CFI7 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.46■■□□□ 1.03
Polr2bQ8CFI7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Polr2bQ8CFI7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Polr2bQ8CFI7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Polr2bQ8CFI7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Polr2bQ8CFI7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Polr2bQ8CFI7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
Polr2bQ8CFI7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Polr2bQ8CFI7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.45■■□□□ 1.02
Polr2bQ8CFI7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Polr2bQ8CFI7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
Polr2bQ8CFI7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Polr2bQ8CFI7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Polr2bQ8CFI7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Polr2bQ8CFI7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Polr2bQ8CFI7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Polr2bQ8CFI7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Polr2bQ8CFI7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Polr2bQ8CFI7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Polr2bQ8CFI7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Polr2bQ8CFI7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Polr2bQ8CFI7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Polr2bQ8CFI7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Polr2bQ8CFI7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Polr2bQ8CFI7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Polr2bQ8CFI7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Polr2bQ8CFI7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Polr2bQ8CFI7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Polr2bQ8CFI7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.43■■□□□ 1.02
Polr2bQ8CFI7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Polr2bQ8CFI7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Polr2bQ8CFI7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Polr2bQ8CFI7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
Polr2bQ8CFI7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Polr2bQ8CFI7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Polr2bQ8CFI7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Polr2bQ8CFI7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Polr2bQ8CFI7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Polr2bQ8CFI7 Gm15039-201ENSMUST00000118914 875 ntBASIC21.42■■□□□ 1.02
Polr2bQ8CFI7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Polr2bQ8CFI7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Polr2bQ8CFI7 Mir7075-201ENSMUST00000184187 82 ntBASIC21.42■■□□□ 1.02
Polr2bQ8CFI7 Mir6236-201ENSMUST00000184437 123 ntBASIC21.42■■□□□ 1.02
Polr2bQ8CFI7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Polr2bQ8CFI7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Polr2bQ8CFI7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Polr2bQ8CFI7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Polr2bQ8CFI7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Polr2bQ8CFI7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Polr2bQ8CFI7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Polr2bQ8CFI7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Polr2bQ8CFI7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Polr2bQ8CFI7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.41■■□□□ 1.02
Polr2bQ8CFI7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.41■■□□□ 1.02
Polr2bQ8CFI7 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.41■■□□□ 1.02
Polr2bQ8CFI7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Polr2bQ8CFI7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Polr2bQ8CFI7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Polr2bQ8CFI7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Polr2bQ8CFI7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Polr2bQ8CFI7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Polr2bQ8CFI7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Polr2bQ8CFI7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Polr2bQ8CFI7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Polr2bQ8CFI7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Polr2bQ8CFI7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Polr2bQ8CFI7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Polr2bQ8CFI7 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.39■■□□□ 1.02
Polr2bQ8CFI7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms