Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Vcpip1Q8CDG3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vcpip1Q8CDG3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vcpip1Q8CDG3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vcpip1Q8CDG3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vcpip1Q8CDG3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Vcpip1Q8CDG3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Vcpip1Q8CDG3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vcpip1Q8CDG3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vcpip1Q8CDG3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.51■■□□□ 1.03
Vcpip1Q8CDG3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.5■■□□□ 1.03
Vcpip1Q8CDG3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Vcpip1Q8CDG3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vcpip1Q8CDG3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.5■■□□□ 1.03
Vcpip1Q8CDG3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.5■■□□□ 1.03
Vcpip1Q8CDG3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vcpip1Q8CDG3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vcpip1Q8CDG3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vcpip1Q8CDG3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vcpip1Q8CDG3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vcpip1Q8CDG3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vcpip1Q8CDG3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vcpip1Q8CDG3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Vcpip1Q8CDG3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.49■■□□□ 1.03
Vcpip1Q8CDG3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Vcpip1Q8CDG3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vcpip1Q8CDG3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vcpip1Q8CDG3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Vcpip1Q8CDG3 Gm7143-201ENSMUST00000222811 859 ntBASIC21.48■■□□□ 1.03
Vcpip1Q8CDG3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vcpip1Q8CDG3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vcpip1Q8CDG3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vcpip1Q8CDG3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vcpip1Q8CDG3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vcpip1Q8CDG3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Vcpip1Q8CDG3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vcpip1Q8CDG3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vcpip1Q8CDG3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Vcpip1Q8CDG3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vcpip1Q8CDG3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vcpip1Q8CDG3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vcpip1Q8CDG3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.47■■□□□ 1.03
Vcpip1Q8CDG3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vcpip1Q8CDG3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vcpip1Q8CDG3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Vcpip1Q8CDG3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vcpip1Q8CDG3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Vcpip1Q8CDG3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vcpip1Q8CDG3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vcpip1Q8CDG3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
Vcpip1Q8CDG3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vcpip1Q8CDG3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vcpip1Q8CDG3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vcpip1Q8CDG3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vcpip1Q8CDG3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vcpip1Q8CDG3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vcpip1Q8CDG3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vcpip1Q8CDG3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vcpip1Q8CDG3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Vcpip1Q8CDG3 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.46■■□□□ 1.03
Vcpip1Q8CDG3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vcpip1Q8CDG3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.45■■□□□ 1.02
Vcpip1Q8CDG3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.45■■□□□ 1.02
Vcpip1Q8CDG3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vcpip1Q8CDG3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Vcpip1Q8CDG3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vcpip1Q8CDG3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vcpip1Q8CDG3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Vcpip1Q8CDG3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Vcpip1Q8CDG3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vcpip1Q8CDG3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vcpip1Q8CDG3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vcpip1Q8CDG3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.44■■□□□ 1.02
Vcpip1Q8CDG3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vcpip1Q8CDG3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Vcpip1Q8CDG3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.44■■□□□ 1.02
Vcpip1Q8CDG3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Vcpip1Q8CDG3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vcpip1Q8CDG3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vcpip1Q8CDG3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vcpip1Q8CDG3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vcpip1Q8CDG3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Vcpip1Q8CDG3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Vcpip1Q8CDG3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vcpip1Q8CDG3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.43■■□□□ 1.02
Vcpip1Q8CDG3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.43■■□□□ 1.02
Vcpip1Q8CDG3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vcpip1Q8CDG3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vcpip1Q8CDG3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vcpip1Q8CDG3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Vcpip1Q8CDG3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.42■■□□□ 1.02
Vcpip1Q8CDG3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.42■■□□□ 1.02
Vcpip1Q8CDG3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vcpip1Q8CDG3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.41■■□□□ 1.02
Vcpip1Q8CDG3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vcpip1Q8CDG3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vcpip1Q8CDG3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Vcpip1Q8CDG3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Vcpip1Q8CDG3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vcpip1Q8CDG3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms