Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Vps53Q8CCB4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC23.19■■□□□ 1.3
Vps53Q8CCB4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Vps53Q8CCB4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Vps53Q8CCB4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Vps53Q8CCB4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Vps53Q8CCB4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Vps53Q8CCB4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Vps53Q8CCB4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Vps53Q8CCB4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Vps53Q8CCB4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Vps53Q8CCB4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Vps53Q8CCB4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Vps53Q8CCB4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Vps53Q8CCB4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Vps53Q8CCB4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Vps53Q8CCB4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
Vps53Q8CCB4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Vps53Q8CCB4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Vps53Q8CCB4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Vps53Q8CCB4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Vps53Q8CCB4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Vps53Q8CCB4 Gm18284-201ENSMUST00000172604 624 ntBASIC23.17■■□□□ 1.3
Vps53Q8CCB4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Vps53Q8CCB4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Vps53Q8CCB4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Vps53Q8CCB4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Vps53Q8CCB4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Vps53Q8CCB4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Vps53Q8CCB4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC23.17■■□□□ 1.3
Vps53Q8CCB4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Vps53Q8CCB4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Vps53Q8CCB4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC23.16■■□□□ 1.3
Vps53Q8CCB4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Vps53Q8CCB4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Vps53Q8CCB4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.16■■□□□ 1.3
Vps53Q8CCB4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Vps53Q8CCB4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Vps53Q8CCB4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Vps53Q8CCB4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Vps53Q8CCB4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC23.15■■□□□ 1.3
Vps53Q8CCB4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vps53Q8CCB4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC23.15■■□□□ 1.3
Vps53Q8CCB4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vps53Q8CCB4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vps53Q8CCB4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vps53Q8CCB4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vps53Q8CCB4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vps53Q8CCB4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Vps53Q8CCB4 Gm9870-201ENSMUST00000063874 645 ntBASIC23.15■■□□□ 1.3
Vps53Q8CCB4 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.15■■□□□ 1.3
Vps53Q8CCB4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vps53Q8CCB4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vps53Q8CCB4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Vps53Q8CCB4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Vps53Q8CCB4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Vps53Q8CCB4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Vps53Q8CCB4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Vps53Q8CCB4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Vps53Q8CCB4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.29
Vps53Q8CCB4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.14■■□□□ 1.29
Vps53Q8CCB4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC23.14■■□□□ 1.29
Vps53Q8CCB4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Vps53Q8CCB4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Vps53Q8CCB4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vps53Q8CCB4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Vps53Q8CCB4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
Vps53Q8CCB4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Vps53Q8CCB4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vps53Q8CCB4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.13■■□□□ 1.29
Vps53Q8CCB4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC23.13■■□□□ 1.29
Vps53Q8CCB4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vps53Q8CCB4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vps53Q8CCB4 Gm6139-201ENSMUST00000079261 882 ntBASIC23.13■■□□□ 1.29
Vps53Q8CCB4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vps53Q8CCB4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vps53Q8CCB4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vps53Q8CCB4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Vps53Q8CCB4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Vps53Q8CCB4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Vps53Q8CCB4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Vps53Q8CCB4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vps53Q8CCB4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Vps53Q8CCB4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC23.11■■□□□ 1.29
Vps53Q8CCB4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC23.11■■□□□ 1.29
Vps53Q8CCB4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Vps53Q8CCB4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Vps53Q8CCB4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vps53Q8CCB4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vps53Q8CCB4 Gm4430-201ENSMUST00000192413 1943 ntBASIC23.11■■□□□ 1.29
Vps53Q8CCB4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vps53Q8CCB4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.11■■□□□ 1.29
Vps53Q8CCB4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vps53Q8CCB4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vps53Q8CCB4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
Vps53Q8CCB4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Vps53Q8CCB4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Vps53Q8CCB4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.1■■□□□ 1.29
Vps53Q8CCB4 Gm2011-201ENSMUST00000203124 1263 ntBASIC23.1■■□□□ 1.29
Vps53Q8CCB4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 256.1 ms