Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Usp40Q8BWR4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC27.73■■■□□ 2.03
Usp40Q8BWR4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Usp40Q8BWR4 Gm7291-201ENSMUST00000199147 382 ntBASIC27.73■■■□□ 2.03
Usp40Q8BWR4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
Usp40Q8BWR4 Gm17641-201ENSMUST00000166328 2350 ntBASIC27.72■■■□□ 2.03
Usp40Q8BWR4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Usp40Q8BWR4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Usp40Q8BWR4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
Usp40Q8BWR4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Usp40Q8BWR4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Usp40Q8BWR4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Usp40Q8BWR4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Usp40Q8BWR4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC27.71■■■□□ 2.03
Usp40Q8BWR4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Usp40Q8BWR4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Usp40Q8BWR4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC27.7■■■□□ 2.03
Usp40Q8BWR4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC27.7■■■□□ 2.02
Usp40Q8BWR4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
Usp40Q8BWR4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC27.7■■■□□ 2.02
Usp40Q8BWR4 Gm42569-201ENSMUST00000200539 472 ntBASIC27.7■■■□□ 2.02
Usp40Q8BWR4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Usp40Q8BWR4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
Usp40Q8BWR4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Usp40Q8BWR4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Usp40Q8BWR4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Usp40Q8BWR4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Usp40Q8BWR4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Usp40Q8BWR4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Usp40Q8BWR4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC27.69■■■□□ 2.02
Usp40Q8BWR4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Usp40Q8BWR4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Usp40Q8BWR4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Usp40Q8BWR4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Usp40Q8BWR4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Usp40Q8BWR4 Gm29257-201ENSMUST00000186115 639 ntBASIC27.68■■■□□ 2.02
Usp40Q8BWR4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Usp40Q8BWR4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Usp40Q8BWR4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC27.67■■■□□ 2.02
Usp40Q8BWR4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
Usp40Q8BWR4 Gm5297-201ENSMUST00000198555 1171 ntBASIC27.67■■■□□ 2.02
Usp40Q8BWR4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
Usp40Q8BWR4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
Usp40Q8BWR4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Usp40Q8BWR4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Usp40Q8BWR4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Usp40Q8BWR4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Usp40Q8BWR4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC27.66■■■□□ 2.02
Usp40Q8BWR4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Usp40Q8BWR4 Gm27405-201ENSMUST00000184201 112 ntBASIC27.66■■■□□ 2.02
Usp40Q8BWR4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Usp40Q8BWR4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Usp40Q8BWR4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC27.66■■■□□ 2.02
Usp40Q8BWR4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
Usp40Q8BWR4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC27.65■■■□□ 2.02
Usp40Q8BWR4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
Usp40Q8BWR4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC27.65■■■□□ 2.02
Usp40Q8BWR4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Usp40Q8BWR4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC27.65■■■□□ 2.02
Usp40Q8BWR4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Usp40Q8BWR4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Usp40Q8BWR4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Usp40Q8BWR4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Usp40Q8BWR4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Usp40Q8BWR4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.02
Usp40Q8BWR4 Gm12504-201ENSMUST00000120860 2231 ntBASIC27.64■■■□□ 2.02
Usp40Q8BWR4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
Usp40Q8BWR4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC27.64■■■□□ 2.02
Usp40Q8BWR4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Usp40Q8BWR4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
Usp40Q8BWR4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC27.64■■■□□ 2.02
Usp40Q8BWR4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Usp40Q8BWR4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC27.64■■■□□ 2.01
Usp40Q8BWR4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.01
Usp40Q8BWR4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
Usp40Q8BWR4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC27.63■■■□□ 2.01
Usp40Q8BWR4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC27.63■■■□□ 2.01
Usp40Q8BWR4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Usp40Q8BWR4 Gm10033-202ENSMUST00000211874 928 ntBASIC27.63■■■□□ 2.01
Usp40Q8BWR4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC27.63■■■□□ 2.01
Usp40Q8BWR4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Usp40Q8BWR4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Usp40Q8BWR4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC27.62■■■□□ 2.01
Usp40Q8BWR4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC27.62■■■□□ 2.01
Usp40Q8BWR4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Usp40Q8BWR4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Usp40Q8BWR4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Usp40Q8BWR4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Usp40Q8BWR4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Usp40Q8BWR4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC27.61■■■□□ 2.01
Usp40Q8BWR4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
Usp40Q8BWR4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
Usp40Q8BWR4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Usp40Q8BWR4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Usp40Q8BWR4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
Usp40Q8BWR4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Usp40Q8BWR4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Usp40Q8BWR4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Usp40Q8BWR4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Usp40Q8BWR4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms