Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Usp43Q8BUM9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp43Q8BUM9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp43Q8BUM9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp43Q8BUM9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp43Q8BUM9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp43Q8BUM9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp43Q8BUM9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Usp43Q8BUM9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp43Q8BUM9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp43Q8BUM9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp43Q8BUM9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp43Q8BUM9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp43Q8BUM9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp43Q8BUM9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.32■□□□□ 0.84
Usp43Q8BUM9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.32■□□□□ 0.84
Usp43Q8BUM9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.32■□□□□ 0.84
Usp43Q8BUM9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp43Q8BUM9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp43Q8BUM9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp43Q8BUM9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp43Q8BUM9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp43Q8BUM9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Usp43Q8BUM9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp43Q8BUM9 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.31■□□□□ 0.84
Usp43Q8BUM9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp43Q8BUM9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.31■□□□□ 0.84
Usp43Q8BUM9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp43Q8BUM9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp43Q8BUM9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp43Q8BUM9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp43Q8BUM9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp43Q8BUM9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp43Q8BUM9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp43Q8BUM9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp43Q8BUM9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp43Q8BUM9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp43Q8BUM9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp43Q8BUM9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Usp43Q8BUM9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp43Q8BUM9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Usp43Q8BUM9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.29■□□□□ 0.84
Usp43Q8BUM9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp43Q8BUM9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp43Q8BUM9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Usp43Q8BUM9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp43Q8BUM9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp43Q8BUM9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp43Q8BUM9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp43Q8BUM9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp43Q8BUM9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp43Q8BUM9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Usp43Q8BUM9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp43Q8BUM9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp43Q8BUM9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp43Q8BUM9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.28■□□□□ 0.84
Usp43Q8BUM9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp43Q8BUM9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp43Q8BUM9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp43Q8BUM9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Usp43Q8BUM9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp43Q8BUM9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp43Q8BUM9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Usp43Q8BUM9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp43Q8BUM9 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.27■□□□□ 0.84
Usp43Q8BUM9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Usp43Q8BUM9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Usp43Q8BUM9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp43Q8BUM9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Usp43Q8BUM9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp43Q8BUM9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.27■□□□□ 0.84
Usp43Q8BUM9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp43Q8BUM9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Usp43Q8BUM9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Usp43Q8BUM9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp43Q8BUM9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp43Q8BUM9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Usp43Q8BUM9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Usp43Q8BUM9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp43Q8BUM9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp43Q8BUM9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp43Q8BUM9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp43Q8BUM9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Usp43Q8BUM9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Usp43Q8BUM9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp43Q8BUM9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp43Q8BUM9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp43Q8BUM9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Usp43Q8BUM9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.26■□□□□ 0.83
Usp43Q8BUM9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp43Q8BUM9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp43Q8BUM9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp43Q8BUM9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Usp43Q8BUM9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Usp43Q8BUM9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp43Q8BUM9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp43Q8BUM9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp43Q8BUM9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp43Q8BUM9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.25■□□□□ 0.83
Usp43Q8BUM9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms