Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhlrc1Q8BR37 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nhlrc1Q8BR37 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhlrc1Q8BR37 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nhlrc1Q8BR37 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nhlrc1Q8BR37 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhlrc1Q8BR37 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhlrc1Q8BR37 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nhlrc1Q8BR37 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhlrc1Q8BR37 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nhlrc1Q8BR37 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.46■□□□□ 0.07
Nhlrc1Q8BR37 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.46■□□□□ 0.07
Nhlrc1Q8BR37 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nhlrc1Q8BR37 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhlrc1Q8BR37 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Nhlrc1Q8BR37 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhlrc1Q8BR37 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.46■□□□□ 0.06
Nhlrc1Q8BR37 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhlrc1Q8BR37 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nhlrc1Q8BR37 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhlrc1Q8BR37 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nhlrc1Q8BR37 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Nhlrc1Q8BR37 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhlrc1Q8BR37 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhlrc1Q8BR37 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhlrc1Q8BR37 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhlrc1Q8BR37 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhlrc1Q8BR37 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nhlrc1Q8BR37 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhlrc1Q8BR37 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nhlrc1Q8BR37 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhlrc1Q8BR37 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nhlrc1Q8BR37 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhlrc1Q8BR37 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhlrc1Q8BR37 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhlrc1Q8BR37 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nhlrc1Q8BR37 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.44■□□□□ 0.06
Nhlrc1Q8BR37 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.44■□□□□ 0.06
Nhlrc1Q8BR37 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nhlrc1Q8BR37 Gm26833-201ENSMUST00000180899 440 ntBASIC15.44■□□□□ 0.06
Nhlrc1Q8BR37 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nhlrc1Q8BR37 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Nhlrc1Q8BR37 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.44■□□□□ 0.06
Nhlrc1Q8BR37 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.44■□□□□ 0.06
Nhlrc1Q8BR37 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nhlrc1Q8BR37 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nhlrc1Q8BR37 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nhlrc1Q8BR37 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nhlrc1Q8BR37 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Nhlrc1Q8BR37 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nhlrc1Q8BR37 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.43■□□□□ 0.06
Nhlrc1Q8BR37 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nhlrc1Q8BR37 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.43■□□□□ 0.06
Nhlrc1Q8BR37 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.43■□□□□ 0.06
Nhlrc1Q8BR37 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.43■□□□□ 0.06
Nhlrc1Q8BR37 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nhlrc1Q8BR37 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nhlrc1Q8BR37 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Nhlrc1Q8BR37 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nhlrc1Q8BR37 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nhlrc1Q8BR37 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nhlrc1Q8BR37 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.43■□□□□ 0.06
Nhlrc1Q8BR37 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nhlrc1Q8BR37 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nhlrc1Q8BR37 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.42■□□□□ 0.06
Nhlrc1Q8BR37 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nhlrc1Q8BR37 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.42■□□□□ 0.06
Nhlrc1Q8BR37 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nhlrc1Q8BR37 Gm12251-201ENSMUST00000117893 792 ntBASIC15.42■□□□□ 0.06
Nhlrc1Q8BR37 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nhlrc1Q8BR37 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nhlrc1Q8BR37 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nhlrc1Q8BR37 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nhlrc1Q8BR37 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nhlrc1Q8BR37 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nhlrc1Q8BR37 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Nhlrc1Q8BR37 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.42■□□□□ 0.06
Nhlrc1Q8BR37 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nhlrc1Q8BR37 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nhlrc1Q8BR37 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nhlrc1Q8BR37 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.41■□□□□ 0.06
Nhlrc1Q8BR37 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nhlrc1Q8BR37 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.41■□□□□ 0.06
Nhlrc1Q8BR37 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.41■□□□□ 0.06
Nhlrc1Q8BR37 Gm5874-201ENSMUST00000096101 508 ntBASIC15.41■□□□□ 0.06
Nhlrc1Q8BR37 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.41■□□□□ 0.06
Nhlrc1Q8BR37 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Nhlrc1Q8BR37 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nhlrc1Q8BR37 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nhlrc1Q8BR37 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.41■□□□□ 0.06
Nhlrc1Q8BR37 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nhlrc1Q8BR37 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Nhlrc1Q8BR37 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Nhlrc1Q8BR37 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nhlrc1Q8BR37 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.4■□□□□ 0.06
Nhlrc1Q8BR37 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nhlrc1Q8BR37 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.4■□□□□ 0.06
Nhlrc1Q8BR37 Gm43060-201ENSMUST00000200621 289 ntBASIC15.4■□□□□ 0.06
Nhlrc1Q8BR37 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Nhlrc1Q8BR37 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 600.4 ms