Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf4Q8BQZ5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf4Q8BQZ5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cpsf4Q8BQZ5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cpsf4Q8BQZ5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf4Q8BQZ5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf4Q8BQZ5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf4Q8BQZ5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf4Q8BQZ5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf4Q8BQZ5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Cpsf4Q8BQZ5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf4Q8BQZ5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf4Q8BQZ5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpsf4Q8BQZ5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Cpsf4Q8BQZ5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cpsf4Q8BQZ5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cpsf4Q8BQZ5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf4Q8BQZ5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Cpsf4Q8BQZ5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf4Q8BQZ5 Gm21956-201ENSMUST00000179946 522 ntBASIC19.32■□□□□ 0.68
Cpsf4Q8BQZ5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf4Q8BQZ5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf4Q8BQZ5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf4Q8BQZ5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf4Q8BQZ5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf4Q8BQZ5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf4Q8BQZ5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf4Q8BQZ5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf4Q8BQZ5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf4Q8BQZ5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf4Q8BQZ5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cpsf4Q8BQZ5 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.31■□□□□ 0.68
Cpsf4Q8BQZ5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf4Q8BQZ5 Gm9847-201ENSMUST00000052528 599 ntBASIC19.31■□□□□ 0.68
Cpsf4Q8BQZ5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf4Q8BQZ5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf4Q8BQZ5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf4Q8BQZ5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf4Q8BQZ5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf4Q8BQZ5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4Q8BQZ5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf4Q8BQZ5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf4Q8BQZ5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf4Q8BQZ5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf4Q8BQZ5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.29■□□□□ 0.68
Cpsf4Q8BQZ5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.29■□□□□ 0.68
Cpsf4Q8BQZ5 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf4Q8BQZ5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.29■□□□□ 0.68
Cpsf4Q8BQZ5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf4Q8BQZ5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf4Q8BQZ5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.29■□□□□ 0.68
Cpsf4Q8BQZ5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf4Q8BQZ5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf4Q8BQZ5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.28■□□□□ 0.68
Cpsf4Q8BQZ5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cpsf4Q8BQZ5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf4Q8BQZ5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf4Q8BQZ5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf4Q8BQZ5 Gm12922-201ENSMUST00000120626 809 ntBASIC19.28■□□□□ 0.68
Cpsf4Q8BQZ5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.28■□□□□ 0.68
Cpsf4Q8BQZ5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.28■□□□□ 0.68
Cpsf4Q8BQZ5 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf4Q8BQZ5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf4Q8BQZ5 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Cpsf4Q8BQZ5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf4Q8BQZ5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf4Q8BQZ5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf4Q8BQZ5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf4Q8BQZ5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cpsf4Q8BQZ5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Cpsf4Q8BQZ5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cpsf4Q8BQZ5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cpsf4Q8BQZ5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.27■□□□□ 0.68
Cpsf4Q8BQZ5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cpsf4Q8BQZ5 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cpsf4Q8BQZ5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cpsf4Q8BQZ5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cpsf4Q8BQZ5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf4Q8BQZ5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf4Q8BQZ5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms