Protein–RNA interactions for Protein: Q8BP97

Rhbdd3, Rhomboid domain-containing protein 3, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdd3Q8BP97 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rhbdd3Q8BP97 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rhbdd3Q8BP97 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rhbdd3Q8BP97 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rhbdd3Q8BP97 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rhbdd3Q8BP97 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rhbdd3Q8BP97 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rhbdd3Q8BP97 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rhbdd3Q8BP97 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rhbdd3Q8BP97 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rhbdd3Q8BP97 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rhbdd3Q8BP97 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rhbdd3Q8BP97 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rhbdd3Q8BP97 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rhbdd3Q8BP97 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rhbdd3Q8BP97 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.3■□□□□ 0.52
Rhbdd3Q8BP97 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.3■□□□□ 0.52
Rhbdd3Q8BP97 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rhbdd3Q8BP97 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rhbdd3Q8BP97 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rhbdd3Q8BP97 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rhbdd3Q8BP97 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rhbdd3Q8BP97 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rhbdd3Q8BP97 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Gm15820-201ENSMUST00000201566 728 ntBASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Gm40881-201ENSMUST00000223397 166 ntBASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Iqck-206ENSMUST00000208658 2891 ntBASIC18.28■□□□□ 0.52
Rhbdd3Q8BP97 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rhbdd3Q8BP97 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rhbdd3Q8BP97 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rhbdd3Q8BP97 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rhbdd3Q8BP97 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Rhbdd3Q8BP97 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.27■□□□□ 0.52
Rhbdd3Q8BP97 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rhbdd3Q8BP97 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rhbdd3Q8BP97 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rhbdd3Q8BP97 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.26■□□□□ 0.51
Rhbdd3Q8BP97 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rhbdd3Q8BP97 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rhbdd3Q8BP97 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.26■□□□□ 0.51
Rhbdd3Q8BP97 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.26■□□□□ 0.51
Rhbdd3Q8BP97 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.26■□□□□ 0.51
Rhbdd3Q8BP97 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rhbdd3Q8BP97 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rhbdd3Q8BP97 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rhbdd3Q8BP97 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rhbdd3Q8BP97 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rhbdd3Q8BP97 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rhbdd3Q8BP97 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rhbdd3Q8BP97 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rhbdd3Q8BP97 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.25■□□□□ 0.51
Rhbdd3Q8BP97 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rhbdd3Q8BP97 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rhbdd3Q8BP97 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rhbdd3Q8BP97 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rhbdd3Q8BP97 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.24■□□□□ 0.51
Rhbdd3Q8BP97 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rhbdd3Q8BP97 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rhbdd3Q8BP97 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rhbdd3Q8BP97 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rhbdd3Q8BP97 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Rhbdd3Q8BP97 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rhbdd3Q8BP97 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms