Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Otop1Q80VM9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Otop1Q80VM9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Otop1Q80VM9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
Otop1Q80VM9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Otop1Q80VM9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Otop1Q80VM9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.22■□□□□ 0.67
Otop1Q80VM9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Otop1Q80VM9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Otop1Q80VM9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.21■□□□□ 0.67
Otop1Q80VM9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Otop1Q80VM9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Otop1Q80VM9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Otop1Q80VM9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Otop1Q80VM9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Otop1Q80VM9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Otop1Q80VM9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.2■□□□□ 0.66
Otop1Q80VM9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Otop1Q80VM9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Otop1Q80VM9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
Otop1Q80VM9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Otop1Q80VM9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Otop1Q80VM9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Otop1Q80VM9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Otop1Q80VM9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Otop1Q80VM9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Otop1Q80VM9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Otop1Q80VM9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.19■□□□□ 0.66
Otop1Q80VM9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.19■□□□□ 0.66
Otop1Q80VM9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.19■□□□□ 0.66
Otop1Q80VM9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.19■□□□□ 0.66
Otop1Q80VM9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Otop1Q80VM9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Otop1Q80VM9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Otop1Q80VM9 Gm10602-201ENSMUST00000098239 609 ntBASIC19.19■□□□□ 0.66
Otop1Q80VM9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Otop1Q80VM9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Otop1Q80VM9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Otop1Q80VM9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Otop1Q80VM9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Otop1Q80VM9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Otop1Q80VM9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Otop1Q80VM9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Otop1Q80VM9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Otop1Q80VM9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Otop1Q80VM9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Otop1Q80VM9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Otop1Q80VM9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Otop1Q80VM9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Otop1Q80VM9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Otop1Q80VM9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Otop1Q80VM9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Otop1Q80VM9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Otop1Q80VM9 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.17■□□□□ 0.66
Otop1Q80VM9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Otop1Q80VM9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Otop1Q80VM9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.17■□□□□ 0.66
Otop1Q80VM9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Otop1Q80VM9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Otop1Q80VM9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Otop1Q80VM9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Otop1Q80VM9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Otop1Q80VM9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Otop1Q80VM9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Otop1Q80VM9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Otop1Q80VM9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Otop1Q80VM9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.16■□□□□ 0.66
Otop1Q80VM9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Otop1Q80VM9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Otop1Q80VM9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Otop1Q80VM9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Otop1Q80VM9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Otop1Q80VM9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Otop1Q80VM9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Otop1Q80VM9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Otop1Q80VM9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Otop1Q80VM9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Otop1Q80VM9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Otop1Q80VM9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Otop1Q80VM9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Otop1Q80VM9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Otop1Q80VM9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Otop1Q80VM9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Otop1Q80VM9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Otop1Q80VM9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Otop1Q80VM9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Otop1Q80VM9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.15■□□□□ 0.66
Otop1Q80VM9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.15■□□□□ 0.66
Otop1Q80VM9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Otop1Q80VM9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Otop1Q80VM9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Otop1Q80VM9 Gm11421-201ENSMUST00000122124 294 ntBASIC19.14■□□□□ 0.65
Otop1Q80VM9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.14■□□□□ 0.65
Otop1Q80VM9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.14■□□□□ 0.65
Otop1Q80VM9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Otop1Q80VM9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.14■□□□□ 0.65
Otop1Q80VM9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Otop1Q80VM9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Otop1Q80VM9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Otop1Q80VM9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms