Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh8Q7TSK3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.73■□□□□ 0.75
Pcdh8Q7TSK3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh8Q7TSK3 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.73■□□□□ 0.75
Pcdh8Q7TSK3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh8Q7TSK3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Pcdh8Q7TSK3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh8Q7TSK3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
Pcdh8Q7TSK3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
Pcdh8Q7TSK3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh8Q7TSK3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh8Q7TSK3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh8Q7TSK3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh8Q7TSK3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh8Q7TSK3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdh8Q7TSK3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh8Q7TSK3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh8Q7TSK3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdh8Q7TSK3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh8Q7TSK3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Gm12251-201ENSMUST00000117893 792 ntBASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Gm18284-201ENSMUST00000172604 624 ntBASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Gm8495-201ENSMUST00000188740 694 ntBASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Gm43173-201ENSMUST00000202246 593 ntBASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh8Q7TSK3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh8Q7TSK3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh8Q7TSK3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh8Q7TSK3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
Pcdh8Q7TSK3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh8Q7TSK3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh8Q7TSK3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Pcdh8Q7TSK3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh8Q7TSK3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Pcdh8Q7TSK3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh8Q7TSK3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh8Q7TSK3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh8Q7TSK3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh8Q7TSK3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.69■□□□□ 0.74
Pcdh8Q7TSK3 Spcs1-204ENSMUST00000226782 949 ntBASIC19.69■□□□□ 0.74
Pcdh8Q7TSK3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh8Q7TSK3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh8Q7TSK3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh8Q7TSK3 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.68■□□□□ 0.74
Pcdh8Q7TSK3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdh8Q7TSK3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh8Q7TSK3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh8Q7TSK3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh8Q7TSK3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh8Q7TSK3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdh8Q7TSK3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh8Q7TSK3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh8Q7TSK3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh8Q7TSK3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pcdh8Q7TSK3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh8Q7TSK3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh8Q7TSK3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh8Q7TSK3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh8Q7TSK3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh8Q7TSK3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh8Q7TSK3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdh8Q7TSK3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh8Q7TSK3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh8Q7TSK3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh8Q7TSK3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh8Q7TSK3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdh8Q7TSK3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcdh8Q7TSK3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh8Q7TSK3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh8Q7TSK3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdh8Q7TSK3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh8Q7TSK3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh8Q7TSK3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.66■□□□□ 0.74
Pcdh8Q7TSK3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh8Q7TSK3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh8Q7TSK3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdh8Q7TSK3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh8Q7TSK3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Pcdh8Q7TSK3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh8Q7TSK3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh8Q7TSK3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdh8Q7TSK3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.65■□□□□ 0.74
Pcdh8Q7TSK3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh8Q7TSK3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh8Q7TSK3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms