Protein–RNA interactions for Protein: Q6ZWS4

Cnih3, Protein cornichon homolog 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih3Q6ZWS4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.39■□□□□ 0.53
Cnih3Q6ZWS4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.39■□□□□ 0.53
Cnih3Q6ZWS4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnih3Q6ZWS4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnih3Q6ZWS4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cnih3Q6ZWS4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnih3Q6ZWS4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.39■□□□□ 0.53
Cnih3Q6ZWS4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.38■□□□□ 0.53
Cnih3Q6ZWS4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnih3Q6ZWS4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cnih3Q6ZWS4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnih3Q6ZWS4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cnih3Q6ZWS4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Cnih3Q6ZWS4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnih3Q6ZWS4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnih3Q6ZWS4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnih3Q6ZWS4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnih3Q6ZWS4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnih3Q6ZWS4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnih3Q6ZWS4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cnih3Q6ZWS4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnih3Q6ZWS4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cnih3Q6ZWS4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnih3Q6ZWS4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnih3Q6ZWS4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.36■□□□□ 0.53
Cnih3Q6ZWS4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.36■□□□□ 0.53
Cnih3Q6ZWS4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnih3Q6ZWS4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnih3Q6ZWS4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnih3Q6ZWS4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnih3Q6ZWS4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.35■□□□□ 0.53
Cnih3Q6ZWS4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnih3Q6ZWS4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cnih3Q6ZWS4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnih3Q6ZWS4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.35■□□□□ 0.53
Cnih3Q6ZWS4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnih3Q6ZWS4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnih3Q6ZWS4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cnih3Q6ZWS4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cnih3Q6ZWS4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnih3Q6ZWS4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnih3Q6ZWS4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnih3Q6ZWS4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnih3Q6ZWS4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cnih3Q6ZWS4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnih3Q6ZWS4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnih3Q6ZWS4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.34■□□□□ 0.53
Cnih3Q6ZWS4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnih3Q6ZWS4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cnih3Q6ZWS4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Cnih3Q6ZWS4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.33■□□□□ 0.53
Cnih3Q6ZWS4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cnih3Q6ZWS4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cnih3Q6ZWS4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cnih3Q6ZWS4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cnih3Q6ZWS4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cnih3Q6ZWS4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.33■□□□□ 0.52
Cnih3Q6ZWS4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cnih3Q6ZWS4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.33■□□□□ 0.52
Cnih3Q6ZWS4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cnih3Q6ZWS4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cnih3Q6ZWS4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cnih3Q6ZWS4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Cnih3Q6ZWS4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cnih3Q6ZWS4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cnih3Q6ZWS4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cnih3Q6ZWS4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cnih3Q6ZWS4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cnih3Q6ZWS4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cnih3Q6ZWS4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.32■□□□□ 0.52
Cnih3Q6ZWS4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cnih3Q6ZWS4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cnih3Q6ZWS4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cnih3Q6ZWS4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cnih3Q6ZWS4 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.31■□□□□ 0.52
Cnih3Q6ZWS4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cnih3Q6ZWS4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Cnih3Q6ZWS4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cnih3Q6ZWS4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cnih3Q6ZWS4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cnih3Q6ZWS4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cnih3Q6ZWS4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cnih3Q6ZWS4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cnih3Q6ZWS4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cnih3Q6ZWS4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cnih3Q6ZWS4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cnih3Q6ZWS4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cnih3Q6ZWS4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cnih3Q6ZWS4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cnih3Q6ZWS4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.3■□□□□ 0.52
Cnih3Q6ZWS4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cnih3Q6ZWS4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cnih3Q6ZWS4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cnih3Q6ZWS4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cnih3Q6ZWS4 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.29■□□□□ 0.52
Cnih3Q6ZWS4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cnih3Q6ZWS4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cnih3Q6ZWS4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Cnih3Q6ZWS4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cnih3Q6ZWS4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms