Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rif1Q6PR54 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rif1Q6PR54 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rif1Q6PR54 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rif1Q6PR54 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rif1Q6PR54 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rif1Q6PR54 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rif1Q6PR54 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rif1Q6PR54 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.02■□□□□ 0.32
Rif1Q6PR54 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rif1Q6PR54 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.02■□□□□ 0.32
Rif1Q6PR54 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Rif1Q6PR54 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rif1Q6PR54 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rif1Q6PR54 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rif1Q6PR54 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rif1Q6PR54 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Rif1Q6PR54 Gm10231-201ENSMUST00000181584 441 ntBASIC17.01■□□□□ 0.31
Rif1Q6PR54 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rif1Q6PR54 Gm10175-202ENSMUST00000208752 441 ntBASIC17.01■□□□□ 0.31
Rif1Q6PR54 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rif1Q6PR54 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rif1Q6PR54 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rif1Q6PR54 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.01■□□□□ 0.31
Rif1Q6PR54 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rif1Q6PR54 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rif1Q6PR54 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17■□□□□ 0.31
Rif1Q6PR54 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Rif1Q6PR54 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Rif1Q6PR54 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17■□□□□ 0.31
Rif1Q6PR54 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Rif1Q6PR54 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rif1Q6PR54 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Rif1Q6PR54 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17■□□□□ 0.31
Rif1Q6PR54 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17■□□□□ 0.31
Rif1Q6PR54 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rif1Q6PR54 Gm6420-201ENSMUST00000193885 723 ntBASIC17■□□□□ 0.31
Rif1Q6PR54 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rif1Q6PR54 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rif1Q6PR54 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rif1Q6PR54 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Rif1Q6PR54 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rif1Q6PR54 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rif1Q6PR54 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rif1Q6PR54 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rif1Q6PR54 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Rif1Q6PR54 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rif1Q6PR54 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rif1Q6PR54 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.99■□□□□ 0.31
Rif1Q6PR54 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rif1Q6PR54 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rif1Q6PR54 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rif1Q6PR54 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rif1Q6PR54 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Rif1Q6PR54 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.98■□□□□ 0.31
Rif1Q6PR54 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rif1Q6PR54 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.98■□□□□ 0.31
Rif1Q6PR54 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.98■□□□□ 0.31
Rif1Q6PR54 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rif1Q6PR54 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rif1Q6PR54 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rif1Q6PR54 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rif1Q6PR54 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rif1Q6PR54 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rif1Q6PR54 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.97■□□□□ 0.31
Rif1Q6PR54 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rif1Q6PR54 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rif1Q6PR54 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Rif1Q6PR54 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rif1Q6PR54 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rif1Q6PR54 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.97■□□□□ 0.31
Rif1Q6PR54 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rif1Q6PR54 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rif1Q6PR54 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rif1Q6PR54 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rif1Q6PR54 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.96■□□□□ 0.31
Rif1Q6PR54 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.96■□□□□ 0.31
Rif1Q6PR54 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rif1Q6PR54 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rif1Q6PR54 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rif1Q6PR54 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rif1Q6PR54 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rif1Q6PR54 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rif1Q6PR54 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.96■□□□□ 0.3
Rif1Q6PR54 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Rif1Q6PR54 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rif1Q6PR54 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rif1Q6PR54 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.96■□□□□ 0.3
Rif1Q6PR54 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rif1Q6PR54 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rif1Q6PR54 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rif1Q6PR54 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rif1Q6PR54 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rif1Q6PR54 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rif1Q6PR54 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rif1Q6PR54 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rif1Q6PR54 Gm43799-201ENSMUST00000201845 579 ntBASIC16.95■□□□□ 0.3
Rif1Q6PR54 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rif1Q6PR54 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rif1Q6PR54 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms