Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm7977-201ENSMUST00000193787 748 ntBASIC22.14■■□□□ 1.13
ShbQ6PD21 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC22.14■■□□□ 1.13
ShbQ6PD21 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ShbQ6PD21 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
ShbQ6PD21 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
ShbQ6PD21 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
ShbQ6PD21 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ShbQ6PD21 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ShbQ6PD21 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ShbQ6PD21 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC22.13■■□□□ 1.13
ShbQ6PD21 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
ShbQ6PD21 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.13■■□□□ 1.13
ShbQ6PD21 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
ShbQ6PD21 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
ShbQ6PD21 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ShbQ6PD21 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
ShbQ6PD21 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
ShbQ6PD21 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC22.12■■□□□ 1.13
ShbQ6PD21 Gm20049-201ENSMUST00000219950 730 ntBASIC22.12■■□□□ 1.13
ShbQ6PD21 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ShbQ6PD21 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
ShbQ6PD21 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
ShbQ6PD21 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ShbQ6PD21 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ShbQ6PD21 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ShbQ6PD21 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
ShbQ6PD21 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ShbQ6PD21 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ShbQ6PD21 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ShbQ6PD21 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
ShbQ6PD21 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ShbQ6PD21 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ShbQ6PD21 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC22.1■■□□□ 1.13
ShbQ6PD21 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ShbQ6PD21 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC22.1■■□□□ 1.13
ShbQ6PD21 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ShbQ6PD21 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ShbQ6PD21 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ShbQ6PD21 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ShbQ6PD21 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.09■■□□□ 1.13
ShbQ6PD21 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
ShbQ6PD21 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
ShbQ6PD21 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
ShbQ6PD21 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC22.09■■□□□ 1.13
ShbQ6PD21 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ShbQ6PD21 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
ShbQ6PD21 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ShbQ6PD21 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.08■■□□□ 1.13
ShbQ6PD21 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ShbQ6PD21 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC22.08■■□□□ 1.13
ShbQ6PD21 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC22.08■■□□□ 1.13
ShbQ6PD21 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ShbQ6PD21 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC22.08■■□□□ 1.13
ShbQ6PD21 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ShbQ6PD21 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.08■■□□□ 1.13
ShbQ6PD21 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC22.08■■□□□ 1.13
ShbQ6PD21 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
ShbQ6PD21 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.08■■□□□ 1.12
ShbQ6PD21 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ShbQ6PD21 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ShbQ6PD21 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
ShbQ6PD21 Mir6236-201ENSMUST00000184437 123 ntBASIC22.07■■□□□ 1.12
ShbQ6PD21 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ShbQ6PD21 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ShbQ6PD21 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ShbQ6PD21 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ShbQ6PD21 Gm7290-201ENSMUST00000104990 617 ntBASIC22.06■■□□□ 1.12
ShbQ6PD21 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
ShbQ6PD21 Gm12918-201ENSMUST00000120234 636 ntBASIC22.06■■□□□ 1.12
ShbQ6PD21 Gm15710-201ENSMUST00000121821 636 ntBASIC22.06■■□□□ 1.12
ShbQ6PD21 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.06■■□□□ 1.12
ShbQ6PD21 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ShbQ6PD21 Gm5075-201ENSMUST00000196916 622 ntBASIC22.06■■□□□ 1.12
ShbQ6PD21 Gm5408-201ENSMUST00000197998 747 ntBASIC22.06■■□□□ 1.12
ShbQ6PD21 AC135637.1-201ENSMUST00000227750 365 ntBASIC22.06■■□□□ 1.12
ShbQ6PD21 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC22.06■■□□□ 1.12
ShbQ6PD21 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC22.06■■□□□ 1.12
ShbQ6PD21 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ShbQ6PD21 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ShbQ6PD21 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ShbQ6PD21 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ShbQ6PD21 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ShbQ6PD21 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ShbQ6PD21 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ShbQ6PD21 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
ShbQ6PD21 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC22.05■■□□□ 1.12
ShbQ6PD21 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ShbQ6PD21 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
ShbQ6PD21 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
ShbQ6PD21 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC22.04■■□□□ 1.12
ShbQ6PD21 AC135963.1-201ENSMUST00000211640 717 ntBASIC22.04■■□□□ 1.12
ShbQ6PD21 Gm6365-201ENSMUST00000054711 744 ntBASIC22.04■■□□□ 1.12
ShbQ6PD21 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ShbQ6PD21 Gm13146-201ENSMUST00000118508 780 ntBASIC22.03■■□□□ 1.12
ShbQ6PD21 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ShbQ6PD21 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
ShbQ6PD21 Gm10812-201ENSMUST00000099864 546 ntBASIC22.03■■□□□ 1.12
ShbQ6PD21 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
ShbQ6PD21 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ShbQ6PD21 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms