Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ParpbpQ6IRT3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ParpbpQ6IRT3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.7■□□□□ 0.58
ParpbpQ6IRT3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ParpbpQ6IRT3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ParpbpQ6IRT3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ParpbpQ6IRT3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ParpbpQ6IRT3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.69■□□□□ 0.58
ParpbpQ6IRT3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.69■□□□□ 0.58
ParpbpQ6IRT3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ParpbpQ6IRT3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ParpbpQ6IRT3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ParpbpQ6IRT3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ParpbpQ6IRT3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.69■□□□□ 0.58
ParpbpQ6IRT3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
ParpbpQ6IRT3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
ParpbpQ6IRT3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ParpbpQ6IRT3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ParpbpQ6IRT3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ParpbpQ6IRT3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ParpbpQ6IRT3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ParpbpQ6IRT3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ParpbpQ6IRT3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ParpbpQ6IRT3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ParpbpQ6IRT3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ParpbpQ6IRT3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ParpbpQ6IRT3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ParpbpQ6IRT3 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.67■□□□□ 0.58
ParpbpQ6IRT3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ParpbpQ6IRT3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ParpbpQ6IRT3 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.67■□□□□ 0.58
ParpbpQ6IRT3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
ParpbpQ6IRT3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ParpbpQ6IRT3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ParpbpQ6IRT3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ParpbpQ6IRT3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ParpbpQ6IRT3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ParpbpQ6IRT3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ParpbpQ6IRT3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ParpbpQ6IRT3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ParpbpQ6IRT3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ParpbpQ6IRT3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ParpbpQ6IRT3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ParpbpQ6IRT3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ParpbpQ6IRT3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.65■□□□□ 0.58
ParpbpQ6IRT3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ParpbpQ6IRT3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ParpbpQ6IRT3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ParpbpQ6IRT3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ParpbpQ6IRT3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ParpbpQ6IRT3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ParpbpQ6IRT3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ParpbpQ6IRT3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ParpbpQ6IRT3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ParpbpQ6IRT3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ParpbpQ6IRT3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.64■□□□□ 0.57
ParpbpQ6IRT3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ParpbpQ6IRT3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ParpbpQ6IRT3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ParpbpQ6IRT3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ParpbpQ6IRT3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ParpbpQ6IRT3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ParpbpQ6IRT3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ParpbpQ6IRT3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ParpbpQ6IRT3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
ParpbpQ6IRT3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ParpbpQ6IRT3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ParpbpQ6IRT3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.63■□□□□ 0.57
ParpbpQ6IRT3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ParpbpQ6IRT3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ParpbpQ6IRT3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
ParpbpQ6IRT3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ParpbpQ6IRT3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ParpbpQ6IRT3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ParpbpQ6IRT3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ParpbpQ6IRT3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ParpbpQ6IRT3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ParpbpQ6IRT3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ParpbpQ6IRT3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ParpbpQ6IRT3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ParpbpQ6IRT3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ParpbpQ6IRT3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.62■□□□□ 0.57
ParpbpQ6IRT3 Gm43530-201ENSMUST00000195920 274 ntBASIC18.62■□□□□ 0.57
ParpbpQ6IRT3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ParpbpQ6IRT3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ParpbpQ6IRT3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ParpbpQ6IRT3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.62■□□□□ 0.57
ParpbpQ6IRT3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ParpbpQ6IRT3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ParpbpQ6IRT3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ParpbpQ6IRT3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ParpbpQ6IRT3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ParpbpQ6IRT3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ParpbpQ6IRT3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ParpbpQ6IRT3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ParpbpQ6IRT3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ParpbpQ6IRT3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.61■□□□□ 0.57
ParpbpQ6IRT3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.61■□□□□ 0.57
ParpbpQ6IRT3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ParpbpQ6IRT3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms