Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.77■□□□□ 0.92
Cep290Q6A078 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cep290Q6A078 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Cep290Q6A078 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cep290Q6A078 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cep290Q6A078 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Cep290Q6A078 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Cep290Q6A078 Gm6211-202ENSMUST00000167849 925 ntBASIC20.76■□□□□ 0.91
Cep290Q6A078 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cep290Q6A078 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cep290Q6A078 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cep290Q6A078 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Cep290Q6A078 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cep290Q6A078 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cep290Q6A078 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.75■□□□□ 0.91
Cep290Q6A078 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cep290Q6A078 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cep290Q6A078 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cep290Q6A078 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cep290Q6A078 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.75■□□□□ 0.91
Cep290Q6A078 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.75■□□□□ 0.91
Cep290Q6A078 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cep290Q6A078 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.75■□□□□ 0.91
Cep290Q6A078 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cep290Q6A078 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cep290Q6A078 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cep290Q6A078 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Cep290Q6A078 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cep290Q6A078 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cep290Q6A078 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.74■□□□□ 0.91
Cep290Q6A078 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cep290Q6A078 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cep290Q6A078 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.73■□□□□ 0.91
Cep290Q6A078 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cep290Q6A078 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Cep290Q6A078 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.73■□□□□ 0.91
Cep290Q6A078 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cep290Q6A078 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cep290Q6A078 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cep290Q6A078 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.73■□□□□ 0.91
Cep290Q6A078 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cep290Q6A078 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cep290Q6A078 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cep290Q6A078 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cep290Q6A078 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cep290Q6A078 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.72■□□□□ 0.91
Cep290Q6A078 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cep290Q6A078 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.72■□□□□ 0.91
Cep290Q6A078 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.72■□□□□ 0.91
Cep290Q6A078 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.72■□□□□ 0.91
Cep290Q6A078 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Cep290Q6A078 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.72■□□□□ 0.91
Cep290Q6A078 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cep290Q6A078 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cep290Q6A078 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.71■□□□□ 0.91
Cep290Q6A078 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.71■□□□□ 0.91
Cep290Q6A078 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cep290Q6A078 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cep290Q6A078 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Cep290Q6A078 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.71■□□□□ 0.91
Cep290Q6A078 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.71■□□□□ 0.91
Cep290Q6A078 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.71■□□□□ 0.91
Cep290Q6A078 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cep290Q6A078 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cep290Q6A078 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cep290Q6A078 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Cep290Q6A078 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cep290Q6A078 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cep290Q6A078 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cep290Q6A078 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cep290Q6A078 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cep290Q6A078 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.7■□□□□ 0.9
Cep290Q6A078 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cep290Q6A078 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cep290Q6A078 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cep290Q6A078 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cep290Q6A078 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cep290Q6A078 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cep290Q6A078 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cep290Q6A078 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cep290Q6A078 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cep290Q6A078 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cep290Q6A078 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cep290Q6A078 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cep290Q6A078 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cep290Q6A078 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cep290Q6A078 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cep290Q6A078 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cep290Q6A078 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Cep290Q6A078 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cep290Q6A078 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cep290Q6A078 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Cep290Q6A078 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cep290Q6A078 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.67■□□□□ 0.9
Cep290Q6A078 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cep290Q6A078 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cep290Q6A078 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cep290Q6A078 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cep290Q6A078 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.66■□□□□ 0.9
Cep290Q6A078 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms