Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AtmQ62388 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.28■□□□□ 0.68
AtmQ62388 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AtmQ62388 Gm20049-201ENSMUST00000219950 730 ntBASIC19.28■□□□□ 0.68
AtmQ62388 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AtmQ62388 Gm13234-201ENSMUST00000120010 747 ntBASIC19.27■□□□□ 0.68
AtmQ62388 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
AtmQ62388 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AtmQ62388 Gm37856-201ENSMUST00000191634 999 ntBASIC19.27■□□□□ 0.68
AtmQ62388 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AtmQ62388 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AtmQ62388 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.27■□□□□ 0.68
AtmQ62388 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
AtmQ62388 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
AtmQ62388 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.26■□□□□ 0.67
AtmQ62388 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
AtmQ62388 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AtmQ62388 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
AtmQ62388 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AtmQ62388 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AtmQ62388 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
AtmQ62388 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.25■□□□□ 0.67
AtmQ62388 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AtmQ62388 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
AtmQ62388 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
AtmQ62388 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AtmQ62388 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.25■□□□□ 0.67
AtmQ62388 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
AtmQ62388 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AtmQ62388 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AtmQ62388 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AtmQ62388 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AtmQ62388 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.24■□□□□ 0.67
AtmQ62388 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AtmQ62388 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
AtmQ62388 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AtmQ62388 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
AtmQ62388 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AtmQ62388 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.24■□□□□ 0.67
AtmQ62388 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
AtmQ62388 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
AtmQ62388 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
AtmQ62388 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.23■□□□□ 0.67
AtmQ62388 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.23■□□□□ 0.67
AtmQ62388 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
AtmQ62388 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.23■□□□□ 0.67
AtmQ62388 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.23■□□□□ 0.67
AtmQ62388 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AtmQ62388 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AtmQ62388 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.23■□□□□ 0.67
AtmQ62388 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
AtmQ62388 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.23■□□□□ 0.67
AtmQ62388 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
AtmQ62388 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
AtmQ62388 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AtmQ62388 Gm11421-201ENSMUST00000122124 294 ntBASIC19.23■□□□□ 0.67
AtmQ62388 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AtmQ62388 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
AtmQ62388 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
AtmQ62388 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AtmQ62388 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
AtmQ62388 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AtmQ62388 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AtmQ62388 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
AtmQ62388 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AtmQ62388 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AtmQ62388 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AtmQ62388 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AtmQ62388 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AtmQ62388 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AtmQ62388 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AtmQ62388 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
AtmQ62388 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
AtmQ62388 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
AtmQ62388 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AtmQ62388 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
AtmQ62388 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AtmQ62388 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
AtmQ62388 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AtmQ62388 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AtmQ62388 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
AtmQ62388 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
AtmQ62388 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AtmQ62388 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AtmQ62388 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AtmQ62388 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AtmQ62388 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AtmQ62388 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.19■□□□□ 0.66
AtmQ62388 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AtmQ62388 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AtmQ62388 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AtmQ62388 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AtmQ62388 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AtmQ62388 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AtmQ62388 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AtmQ62388 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
AtmQ62388 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AtmQ62388 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
AtmQ62388 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AtmQ62388 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms