Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox16Q62247 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox16Q62247 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Sox16Q62247 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox16Q62247 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox16Q62247 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox16Q62247 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox16Q62247 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox16Q62247 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC11.47□□□□□ -0.57
Sox16Q62247 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox16Q62247 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Sox16Q62247 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox16Q62247 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Sox16Q62247 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox16Q62247 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox16Q62247 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Sox16Q62247 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox16Q62247 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sox16Q62247 Gm45606-201ENSMUST00000209836 2795 ntBASIC11.46□□□□□ -0.57
Sox16Q62247 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox16Q62247 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox16Q62247 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sox16Q62247 AC153962.1-201ENSMUST00000218530 1948 ntBASIC11.46□□□□□ -0.58
Sox16Q62247 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox16Q62247 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox16Q62247 Pcf11-205ENSMUST00000208255 1720 ntBASIC11.46□□□□□ -0.58
Sox16Q62247 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox16Q62247 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sox16Q62247 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Sox16Q62247 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sox16Q62247 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox16Q62247 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Sox16Q62247 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sox16Q62247 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC11.45□□□□□ -0.58
Sox16Q62247 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sox16Q62247 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox16Q62247 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox16Q62247 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox16Q62247 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox16Q62247 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC11.45□□□□□ -0.58
Sox16Q62247 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox16Q62247 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox16Q62247 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox16Q62247 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox16Q62247 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox16Q62247 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.45□□□□□ -0.58
Sox16Q62247 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox16Q62247 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox16Q62247 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox16Q62247 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox16Q62247 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox16Q62247 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox16Q62247 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox16Q62247 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Sox16Q62247 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox16Q62247 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox16Q62247 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox16Q62247 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox16Q62247 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Sox16Q62247 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox16Q62247 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Sox16Q62247 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox16Q62247 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox16Q62247 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox16Q62247 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Sox16Q62247 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox16Q62247 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Sox16Q62247 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox16Q62247 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox16Q62247 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox16Q62247 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox16Q62247 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox16Q62247 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox16Q62247 Gm37194-201ENSMUST00000193092 3031 ntBASIC11.44□□□□□ -0.58
Sox16Q62247 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox16Q62247 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox16Q62247 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sox16Q62247 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox16Q62247 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox16Q62247 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox16Q62247 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox16Q62247 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox16Q62247 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox16Q62247 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox16Q62247 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC11.43□□□□□ -0.58
Sox16Q62247 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox16Q62247 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox16Q62247 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC11.43□□□□□ -0.58
Sox16Q62247 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Sox16Q62247 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sox16Q62247 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox16Q62247 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox16Q62247 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox16Q62247 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC11.42□□□□□ -0.58
Sox16Q62247 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sox16Q62247 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox16Q62247 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox16Q62247 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox16Q62247 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox16Q62247 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms