Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn4Q61418 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.35■□□□□ 0.53
Clcn4Q61418 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn4Q61418 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Clcn4Q61418 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Clcn4Q61418 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn4Q61418 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn4Q61418 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.35■□□□□ 0.53
Clcn4Q61418 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.35■□□□□ 0.53
Clcn4Q61418 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcn4Q61418 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn4Q61418 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn4Q61418 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.34■□□□□ 0.53
Clcn4Q61418 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.34■□□□□ 0.53
Clcn4Q61418 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Clcn4Q61418 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn4Q61418 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn4Q61418 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Clcn4Q61418 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcn4Q61418 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn4Q61418 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn4Q61418 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcn4Q61418 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn4Q61418 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn4Q61418 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn4Q61418 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Clcn4Q61418 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn4Q61418 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Clcn4Q61418 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn4Q61418 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcn4Q61418 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn4Q61418 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Clcn4Q61418 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn4Q61418 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn4Q61418 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.32■□□□□ 0.52
Clcn4Q61418 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn4Q61418 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn4Q61418 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.32■□□□□ 0.52
Clcn4Q61418 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn4Q61418 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn4Q61418 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcn4Q61418 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn4Q61418 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn4Q61418 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn4Q61418 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn4Q61418 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn4Q61418 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn4Q61418 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.31■□□□□ 0.52
Clcn4Q61418 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn4Q61418 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Clcn4Q61418 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn4Q61418 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.31■□□□□ 0.52
Clcn4Q61418 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.31■□□□□ 0.52
Clcn4Q61418 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn4Q61418 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn4Q61418 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcn4Q61418 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.3■□□□□ 0.52
Clcn4Q61418 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Clcn4Q61418 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn4Q61418 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.3■□□□□ 0.52
Clcn4Q61418 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.3■□□□□ 0.52
Clcn4Q61418 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Clcn4Q61418 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn4Q61418 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Clcn4Q61418 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn4Q61418 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Clcn4Q61418 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn4Q61418 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn4Q61418 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcn4Q61418 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn4Q61418 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Clcn4Q61418 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn4Q61418 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn4Q61418 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Clcn4Q61418 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.29■□□□□ 0.52
Clcn4Q61418 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn4Q61418 Gm13241-201ENSMUST00000094493 780 ntBASIC18.29■□□□□ 0.52
Clcn4Q61418 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcn4Q61418 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn4Q61418 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn4Q61418 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn4Q61418 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn4Q61418 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn4Q61418 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn4Q61418 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn4Q61418 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.28■□□□□ 0.52
Clcn4Q61418 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn4Q61418 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn4Q61418 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn4Q61418 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcn4Q61418 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn4Q61418 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn4Q61418 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn4Q61418 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn4Q61418 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.27■□□□□ 0.52
Clcn4Q61418 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Clcn4Q61418 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn4Q61418 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Clcn4Q61418 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.27■□□□□ 0.52
Clcn4Q61418 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms