Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vsx2Q61412 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Vsx2Q61412 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vsx2Q61412 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Vsx2Q61412 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vsx2Q61412 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vsx2Q61412 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Vsx2Q61412 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vsx2Q61412 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vsx2Q61412 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Vsx2Q61412 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vsx2Q61412 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vsx2Q61412 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Vsx2Q61412 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vsx2Q61412 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vsx2Q61412 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.39■□□□□ 0.69
Vsx2Q61412 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vsx2Q61412 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Vsx2Q61412 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vsx2Q61412 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Vsx2Q61412 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.39■□□□□ 0.69
Vsx2Q61412 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vsx2Q61412 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.38■□□□□ 0.69
Vsx2Q61412 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vsx2Q61412 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.38■□□□□ 0.69
Vsx2Q61412 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.38■□□□□ 0.69
Vsx2Q61412 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vsx2Q61412 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vsx2Q61412 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.38■□□□□ 0.69
Vsx2Q61412 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.38■□□□□ 0.69
Vsx2Q61412 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vsx2Q61412 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Vsx2Q61412 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Vsx2Q61412 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vsx2Q61412 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vsx2Q61412 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Vsx2Q61412 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Vsx2Q61412 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vsx2Q61412 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.37■□□□□ 0.69
Vsx2Q61412 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vsx2Q61412 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.37■□□□□ 0.69
Vsx2Q61412 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx2Q61412 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx2Q61412 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Vsx2Q61412 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx2Q61412 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx2Q61412 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx2Q61412 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx2Q61412 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Vsx2Q61412 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx2Q61412 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.36■□□□□ 0.69
Vsx2Q61412 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.36■□□□□ 0.69
Vsx2Q61412 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx2Q61412 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx2Q61412 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx2Q61412 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx2Q61412 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vsx2Q61412 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Vsx2Q61412 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vsx2Q61412 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vsx2Q61412 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vsx2Q61412 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vsx2Q61412 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vsx2Q61412 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Vsx2Q61412 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.35■□□□□ 0.69
Vsx2Q61412 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.35■□□□□ 0.69
Vsx2Q61412 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vsx2Q61412 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vsx2Q61412 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vsx2Q61412 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vsx2Q61412 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx2Q61412 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx2Q61412 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Vsx2Q61412 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx2Q61412 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx2Q61412 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.34■□□□□ 0.69
Vsx2Q61412 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx2Q61412 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx2Q61412 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx2Q61412 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.34■□□□□ 0.69
Vsx2Q61412 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx2Q61412 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx2Q61412 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx2Q61412 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vsx2Q61412 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vsx2Q61412 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vsx2Q61412 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vsx2Q61412 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vsx2Q61412 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Vsx2Q61412 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Vsx2Q61412 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.33■□□□□ 0.68
Vsx2Q61412 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Vsx2Q61412 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Vsx2Q61412 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vsx2Q61412 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vsx2Q61412 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vsx2Q61412 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vsx2Q61412 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vsx2Q61412 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.32■□□□□ 0.68
Vsx2Q61412 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms