Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Foxf1Q61080 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxf1Q61080 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Foxf1Q61080 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.74■□□□□ 0.27
Foxf1Q61080 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.74■□□□□ 0.27
Foxf1Q61080 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Foxf1Q61080 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Foxf1Q61080 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Foxf1Q61080 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Foxf1Q61080 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Foxf1Q61080 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Foxf1Q61080 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Foxf1Q61080 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Foxf1Q61080 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxf1Q61080 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.73■□□□□ 0.27
Foxf1Q61080 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Foxf1Q61080 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxf1Q61080 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Foxf1Q61080 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Foxf1Q61080 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.73■□□□□ 0.27
Foxf1Q61080 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxf1Q61080 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxf1Q61080 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxf1Q61080 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.73■□□□□ 0.27
Foxf1Q61080 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxf1Q61080 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxf1Q61080 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Foxf1Q61080 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxf1Q61080 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxf1Q61080 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.73■□□□□ 0.27
Foxf1Q61080 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Foxf1Q61080 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Foxf1Q61080 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.72■□□□□ 0.27
Foxf1Q61080 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Foxf1Q61080 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Foxf1Q61080 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.72■□□□□ 0.27
Foxf1Q61080 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.72■□□□□ 0.27
Foxf1Q61080 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Foxf1Q61080 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Foxf1Q61080 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Foxf1Q61080 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Foxf1Q61080 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Foxf1Q61080 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Foxf1Q61080 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Foxf1Q61080 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
Foxf1Q61080 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Foxf1Q61080 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.71■□□□□ 0.27
Foxf1Q61080 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Foxf1Q61080 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Foxf1Q61080 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Foxf1Q61080 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Foxf1Q61080 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Foxf1Q61080 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.71■□□□□ 0.27
Foxf1Q61080 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.71■□□□□ 0.27
Foxf1Q61080 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Foxf1Q61080 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Foxf1Q61080 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Foxf1Q61080 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Foxf1Q61080 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Foxf1Q61080 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Foxf1Q61080 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Foxf1Q61080 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Foxf1Q61080 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Foxf1Q61080 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Foxf1Q61080 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.7■□□□□ 0.26
Foxf1Q61080 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Foxf1Q61080 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Foxf1Q61080 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Foxf1Q61080 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.7■□□□□ 0.26
Foxf1Q61080 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Foxf1Q61080 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Foxf1Q61080 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Foxf1Q61080 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.69■□□□□ 0.26
Foxf1Q61080 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Foxf1Q61080 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Foxf1Q61080 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Foxf1Q61080 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Foxf1Q61080 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Foxf1Q61080 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Foxf1Q61080 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Foxf1Q61080 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Foxf1Q61080 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxf1Q61080 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxf1Q61080 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.68■□□□□ 0.26
Foxf1Q61080 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxf1Q61080 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
Foxf1Q61080 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Foxf1Q61080 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxf1Q61080 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxf1Q61080 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxf1Q61080 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxf1Q61080 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Foxf1Q61080 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Foxf1Q61080 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.67■□□□□ 0.26
Foxf1Q61080 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxf1Q61080 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxf1Q61080 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxf1Q61080 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Foxf1Q61080 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxf1Q61080 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms