Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.86■□□□□ 0.77
Sim1Q61045 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sim1Q61045 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Sim1Q61045 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sim1Q61045 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Sim1Q61045 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Sim1Q61045 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Sim1Q61045 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sim1Q61045 Gm27011-201ENSMUST00000182352 972 ntBASIC19.85■□□□□ 0.77
Sim1Q61045 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sim1Q61045 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
Sim1Q61045 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sim1Q61045 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sim1Q61045 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sim1Q61045 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sim1Q61045 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.85■□□□□ 0.77
Sim1Q61045 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sim1Q61045 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sim1Q61045 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sim1Q61045 Gm42642-201ENSMUST00000200683 355 ntBASIC19.84■□□□□ 0.77
Sim1Q61045 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sim1Q61045 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sim1Q61045 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Sim1Q61045 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.84■□□□□ 0.77
Sim1Q61045 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sim1Q61045 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Sim1Q61045 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Sim1Q61045 Gm26833-201ENSMUST00000180899 440 ntBASIC19.83■□□□□ 0.77
Sim1Q61045 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sim1Q61045 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.83■□□□□ 0.77
Sim1Q61045 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.83■□□□□ 0.77
Sim1Q61045 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sim1Q61045 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sim1Q61045 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sim1Q61045 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sim1Q61045 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sim1Q61045 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sim1Q61045 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.82■□□□□ 0.76
Sim1Q61045 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sim1Q61045 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sim1Q61045 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sim1Q61045 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sim1Q61045 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sim1Q61045 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sim1Q61045 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sim1Q61045 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sim1Q61045 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sim1Q61045 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sim1Q61045 Gm43060-201ENSMUST00000200621 289 ntBASIC19.81■□□□□ 0.76
Sim1Q61045 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sim1Q61045 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sim1Q61045 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sim1Q61045 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sim1Q61045 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sim1Q61045 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sim1Q61045 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sim1Q61045 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sim1Q61045 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sim1Q61045 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sim1Q61045 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sim1Q61045 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Sim1Q61045 Gm12251-201ENSMUST00000117893 792 ntBASIC19.8■□□□□ 0.76
Sim1Q61045 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.8■□□□□ 0.76
Sim1Q61045 Gm37179-201ENSMUST00000194862 823 ntBASIC19.8■□□□□ 0.76
Sim1Q61045 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.8■□□□□ 0.76
Sim1Q61045 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.8■□□□□ 0.76
Sim1Q61045 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sim1Q61045 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.79■□□□□ 0.76
Sim1Q61045 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sim1Q61045 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sim1Q61045 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sim1Q61045 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.79■□□□□ 0.76
Sim1Q61045 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.79■□□□□ 0.76
Sim1Q61045 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.79■□□□□ 0.76
Sim1Q61045 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sim1Q61045 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sim1Q61045 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sim1Q61045 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sim1Q61045 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sim1Q61045 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sim1Q61045 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sim1Q61045 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sim1Q61045 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sim1Q61045 Gm7143-201ENSMUST00000222811 859 ntBASIC19.78■□□□□ 0.76
Sim1Q61045 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.78■□□□□ 0.76
Sim1Q61045 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sim1Q61045 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sim1Q61045 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sim1Q61045 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.78■□□□□ 0.76
Sim1Q61045 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sim1Q61045 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.77■□□□□ 0.76
Sim1Q61045 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sim1Q61045 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sim1Q61045 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sim1Q61045 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sim1Q61045 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sim1Q61045 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sim1Q61045 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sim1Q61045 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sim1Q61045 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms